Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq12 188 8e-43
seq3 84.2 3e-11
>seq12
Length=1682134
Score = 188 bits (208), Expect = 8e-43
Identities = 1114/1769 (63%), Gaps = 51/1769 (3%)
Strand=Plus/Plus
Query 109378 AATTGGATTGGTCGAGCTTTCGCCTTCGAGCGAAGATAATACATACCCGTTTTGAGACCA 109437
|||||||| | ||||| |||| | || | || |||||||| ||||| | ||
Sbjct 1114856 AATTGGATGGCACGAGCGGCAGCCTGTGTACGTAAGTAGTACATACCTGTTTTCAAGCCC 1114915
Query 109438 GCCTTCCATGCGTACATATGCATTGAAGAGAGTTTGGAAAGTGTCGGACTCTCCATAAAC 109497
|||||| | || | ||||| |||| | ||| | || || || || |
Sbjct 1114916 TTCTTCCAGCCATAAAAGTGCATGGAAGTCAATTTACCCATAGTTGGTGACTGCAAATGG 1114975
Query 109498 AAGTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATA 109557
| |||||| || |||||||| |||| || || | |||||| ||||| ||||||| |
Sbjct 1114976 ATGTTCATAGATTGAGACTGGCAGATGTATGCGCCCCTATCAGCAGCCATATCGATGACA 1115035
Query 109558 CACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCC 109617
|||| || ||| ||||| || ||| ||||||| |||||||| | |||||||| ||
Sbjct 1115036 GACTTCTGAGAAATCTCCCAAACTGTCCTGTACAACTTCTTGATCTTATCGGGAACGTTT 1115095
Query 109618 ACGATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAG 109677
| ||| |||||||| || | | | |||| | |||||| | | |||
Sbjct 1115096 GGCAAGTTCTGAATAGAACCGTTGTCGTGAATGATGAAGTTCTTCATTGCATCGTTCCAT 1115155
Query 109678 AGACCGACCTTTTTGAGATCG-TCAACAAG--ATGCTTGTTGACCACGACAAATTCACCA 109734
| || | | | ||||| |||||| | | | || || | || ||||||||
Sbjct 1115156 ATTCCCATGTCAATAAGATCTCTCAACATGTAAGGATTAACGATCTGGA---ATTCACCA 1115212
Query 109735 GCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCT 109794
||||| | || | |||||||||| ||| | ||||||||||| || || | ||
Sbjct 1115213 GCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGGTTCGAAACATTCGTTATAACCC 1115272
Query 109795 AGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCC 109854
| || || | ||| ||||| || ||||| || |||| | |||| ||||| |||||
Sbjct 1115273 ATAATCTGGGAAGTAGAAGCAGTCGGCATAGGTGCCACCAAAAGAGAGTTTCTAAGACCA 1115332
Query 109855 TTCGTCTTTACCCGCTCACGCATTGCG----TCCCAATCATAACGACCACTAAATT--TA 109908
||||| | || | || || | ||||| || |||| | || ||
Sbjct 1115333 ---GTCTTGGCAATCTTA-GCCTTCAGAGTATCCCAGTC-------CCAC-AGATCCGTA 1115380
Query 109909 GTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAA 109968
| || | ||||||||| ||| || | ||||| | ||| ||||| || | |
Sbjct 1115381 GGCTTTTTGTTCCACATATCATATTGTAGAATACCCTTTGAAGCTGGAGAGCCTTCATAT 1115440
Query 109969 CTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATAC 110028
||| || | ||||| || | || | || | || |||| | ||| || ||||||
Sbjct 1115441 GTCTGATAAGTACCCTCTTCCACAGCAAGCTGGTTGGATTCCTCCAATGCAGCGTGATAC 1115500
Query 110029 ATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCA 110088
| |||||||| || ||| || | || | ||| |||||| || || || | |
Sbjct 1115501 AAGGTCTCAAATATCTGAATGTTAAGCTCCCGTGCATCTGGACAGTCAAAAGGTAGTCTA 1115560
Query 110089 CAAAGAATAAACAC---ATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTC 110145
|| || || | ||| || |||||||| | ||| ||| |||| || | | ||
Sbjct 1115561 ---AGCATGAAGAAGGTATCAGCAAGACCCTGGATACCAAGAGCAATAGGTCTGTTTCTC 1115617
Query 110146 ATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGA 110205
||||| ||| || || || || || | || | ||| || || || || |
Sbjct 1115618 ATGTTGGAGTTACGGGCCTCAGGAACTGGATAGTAATTTCTGTCAATAACACGGTTTAAG 1115677
Query 110206 TTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACG-----TTTTCG 110260
|| || ||| || || || | || | || ||| | | |||| | ||
Sbjct 1115678 TTACGGGTAACAACTTTAGTAATCTTGTGCAACTTCTCGAAGTTGAACCAGCAATGATCC 1115737
Query 110261 TCTCCTTATTGA-CATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCG 110319
|| || | | | || | || | | ||| || | || |||||| | |||
Sbjct 1115738 TCATCTGACTCAACAAAGGCAGGCAAACAAATGTTGGCCAAGTTACACACACCAACCTCA 1115797
Query 110320 TCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAG 110379
||| || ||| || | || || |||||||| ||| || ||| |||||||
Sbjct 1115798 TCTGGAGAGGAGTACTCGACAACCTCACAGCACAAGTTCGAAGATTTGATGGTACCCAAG 1115857
Query 110380 TTCTTCTGATT-CGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGT 110438
||||||||||| | ||| | || || |||||||| |||| |||| | || ||||||||
Sbjct 1115858 TTCTTCTGATTACTCTTTCTA-TTACAAGCATCCTTGTAGATCATGAAAGGTGTACCAGT 1115916
Query 110439 TTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAG 110497
||| ||||| | || | ||| | ||||| | || | | | || ||| |
Sbjct 1115917 TTCTGTCTGAGCCTCCAAAATCTGGTACCATAACTTCTGAGCCTTC-ACTGTTCTTCTTC 1115975
Query 110498 CGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAG 110557
| | ||||| | |||||| |||||||| | ||| || || | ||||| ||||| |
Sbjct 1115976 CACGTCCTTCTTTCTCGTAACGAGTGTACAATTTCTCGAACTCGTCACCGTAAACATCTG 1116035
Query 110558 AAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATT-TCCACCCTCCTCAACCCTC 110616
| ||||| |||| ||| |||| | | ||| || || ||| || || | |
Sbjct 1116036 AGAGACCTGGTGCCTCAGAAGGAGAGAACAATGTCCACTTGTCGTTGCTC-TCCACACGC 1116094
Query 110617 TTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCA 110676
||||| || | || |||||||| | || | || | ||||| |||| ||| ||
Sbjct 1116095 TTCATAAATAAATCTGGAATCCAAAGAGCTGGAAACAAATCACGTGCACGAATCTCCTCT 1116154
Query 110677 TCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGA 110736
| ||| || || | | || | |||||| | |||||| | ||||| || || |
Sbjct 1116155 TTACCATGATTCTTTCTGATATCGATAAAGTCGAAGATATCAGCATGCCAAGGCTCCAAG 1116214
Query 110737 TAGACAGCGATGGATCC------CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTG 110790
|| | ||| |||| || ||| || ||| || | ||||| | || ||
Sbjct 1116215 TAAATAGCAATGGCACCTGGTCTCTTGTTACCACCT---TGATCCACATATCTAGCAGTA 1116271
Query 110791 GCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATT 110850
||||| || | | ||| ||||| || || | |||| |||||| ||||| |||
Sbjct 1116272 CTGTTGAACACACGAACCATCGGAATTATACCGTTGGATGTACCATTAGTACCGGCAATA 1116331
Query 110851 CTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTA 110910
|| | ||| |||||||| ||| || || | |||||||||||| || |||| |
Sbjct 1116332 TACGAACCAGTGGAACGAATGTTGTGAATGTGAAGACCAATACCACCAGCAGTCTTAGAA 1116391
Query 110911 ATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCA 110970
|| ||||||| | | | ||| | || ||||| ||||| || || | || | |||
Sbjct 1116392 ATCAAAGCACACTGTTTCAAAGTATCGTAGATACCTTCAATAGAGTCATCTTTCATTGCA 1116451
Query 110971 ATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTC 111030
| || ||||| || ||||||||||| || || || || |||||||| | || ||||
Sbjct 1116452 ACTAAGAAGCATGATGACATCTGAGGGCGTGGAGTACCAGCATTGAACAACGTTGGTGAT 1116511
Query 111031 GCATGAATGAACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCT 111090
||||| |||| | | |||||| || |||| || | | || | |||
Sbjct 1116512 GCATGTGTGAAGTATCTCTTTGACATCAAGTCATATGATTCCAACACCTTAGGAATATCA 1116571
Query 111091 TTACCGTGAATACCAATGGCAACTCGCAT 111119
| ||| |||||||| | ||| |||| |||
Sbjct 1116572 TCACCATGAATACCGACGGCCACTCTCAT 1116600
>seq3
Length=519016
Score = 84.2 bits (92), Expect = 3e-11
Identities = 161/235 (69%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 11673 CTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTG 11732
|||||||| ||| ||||||||||| | || || || | ||| || | | |||
Sbjct 450345 CTTACCGATAGCATCAATCTCATCAACAAAAACAATGGATGGTGCATTTTCCCTTGCAGT 450404
Query 11733 TTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGC 11792
| || | ||||| || | || || |||||||| ||||| |||||||| | |
Sbjct 450405 CTTAAACAACTCACGAACTCTTGAAGCACCGACACCTACAAACATTTCAACGAATTCAGA 450464
Query 11793 GGCAGAACACTGAAT-GAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851
| | ||| ||||||| ||| ||||| |||| ||||| || | || ||||| | | ||
Sbjct 450465 GCCTGAA-ACTGAATAGAATGGAACTTTAGCTTCACCCGCAGTTGCACGAGCCAACAAAG 450523
Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC 11906
| ||||| |||||||||| ||| | | || ||||| || ||||| || ||
Sbjct 450524 TTTTACCTGTACCAGGTGGTCCACACAATATCGCACCACGTGGTATCTTAGCTCC 450578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975793858400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |