Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq12 255 7e-63
seq22 134 2e-26
seq3 89.7 6e-13
seq25 87.8 2e-12
>seq12
Length=1682134
Score = 255 bits (282), Expect = 7e-63
Identities = 925/1420 (65%), Gaps = 47/1420 (3%)
Strand=Plus/Plus
Query 105925 TCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTG 105984
||||||| |||||||||| | ||| | ||||| || ||||| |||| ||||| || ||
Sbjct 1115221 TCTTCTCTGATAGATGTTAGAGGTGAATGGTTCGAAACATTCGTTATAACCCATAATCTG 1115280
Query 105985 TGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTT 106044
| || || || || ||||| ||||||| ||||||| ||| | |||||| | |||
Sbjct 1115281 GGAAGTAGAAGCAGTCGGCATAGGTGCCACCAAAAGAGAGTTTCTAAGACCAGT---CTT 1115337
Query 106045 G---ATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGC--TTGGTTTCACCTTCCCAC 106099
| || |||| ||| ||||||||| | || | | || || |||| ||
Sbjct 1115338 GGCAATCTTAGCCTTCAGAGTATCCCAGTCCCACA-GATCCGTAGGCTTTTTGTTCC-AC 1115395
Query 106100 ATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCT 106159
|||||| |||| || | || | || | ||||| || ||| |||||| ||| | |||
Sbjct 1115396 ATATCATATTGTAGAATACCCTTTGAAGCTGGAGAGCCTTCATATGTCTGATAAGTACCC 1115455
Query 106160 TGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATA 106219
| | |||| | | | |||||| | |||||||||| ||| ||||| ||
Sbjct 1115456 TCTTCCACAGCAAGCTGGTTGGATTCCTCCAATGCAGCGTGATACAAGGTCTCAAATATC 1115515
Query 106220 CGAGCATTCATCTCCTTGGCTTCATCTGAA---TCAAATGCGTAGCGGCA-CAAAATAAA 106275
|| || | |||| || ||||| | ||||| | |||| | || | ||
Sbjct 1115516 TGAATGTTAAGCTCCCGTGC---ATCTGGACAGTCAAAAG-GTAGTCTAAGCATGAAGAA 1115571
Query 106276 TACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCG 106335
||| || ||||| || | ||| | | |||||||||||| || ||| || || || ||
Sbjct 1115572 GGTATCAGCAAGACCCTGGATACCAAGAGCAATAGGTCTGTTTCTCATGTTGGAGTTACG 1115631
Query 106336 CGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAAC 106392
|| |||| || ||||| ||||||||||||| || ||||||| || ||||||
Sbjct 1115632 GGC---CTCAGGAACTGGATAGTAATTTCTGTCAATAACACGGTTTAAGTTACGGGTAAC 1115688
Query 106393 AATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCAT-TGACAT 106451
|| || || || | || | || || | | || || | || |||| ||||
Sbjct 1115689 AACTTTAGTAATCTTGTGCAACTTCTCGAAGTTGAACCAGCAATGATCCTCATCTGACTC 1115748
Query 106452 A-CTTTGGAAGGG---CGATTGATG-CCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 106506
| | || ||| | | || || |||| || || ||| | |||||| | |
Sbjct 1115749 AACAAAGGCAGGCAAACAAATGTTGGCCAAGTTACACACACCAACCTCATCTGGAGAGGA 1115808
Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566
|||||| | || || |||||||| ||| || || || ||||| ||||| || ||
Sbjct 1115809 GTACTCGACAACCTCACAGCACAAGTTCGAAGATTTGATGGTACCCAAGTTCTTCTGATT 1115868
Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 106626
||||||| | || || ||||||||||||| |||| | || || || || || ||||| |
Sbjct 1115869 ACTCTTTCTATTACAAGCATCCTTGTAGATCATGAAAGGTGTACCAGTTTCTGTCTGAGC 1115928
Query 106627 CTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCC--GTCCCTC 106683
|| | ||| | ||| | | || | | || || || || || |||| ||
Sbjct 1115929 CTCCAAAATCTGGTACCATAACTTCTGAGCCTT---CACTGTTCTTCTTCCACGTCCTTC 1115985
Query 106684 CGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGG 106743
|||||| ||||| | || ||||| ||||| | || |||||||||||
Sbjct 1115986 TTTCTCGTAACGAGTGTACAATTTCTCGAACTCGTCACCGTAAACATCTGAGAGACCTGG 1116045
Query 106744 TGCCTTGTCTGGACAGAAAAGAGACCA-TTGACCACCCTCCTCAACCCGCTTCATGAAAA 106802
||||| ||| |||| | | ||| ||| | ||| || || |||||||| || |
Sbjct 1116046 TGCCTCAGAAGGAGAGAACAATGTCCACTTGTCGTTGCTC-TCCACACGCTTCATAAATA 1116104
Query 106803 GGTCTGGAATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGG 106861
||||||||||| || | || ||| | ||| | | || ||| ||| || | ||| ||
Sbjct 1116105 AATCTGGAATCCAAAGAGCTGGAAACAAATCACGTGCA-CGAATCTCCTCTTTACCATGA 1116163
Query 106862 TTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCG 106921
|| || | || | || || | |||||| || ||||| ||||| | || | ||
Sbjct 1116164 TTCTTTCTGATATCGATAAAGTCGAAGATATCAGCATGCCAAGGCTCCAAGTAAATAGCA 1116223
Query 106922 ATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATAC 106977
|| | || || | | ||| |||||| ||||| | || || ||| || ||
Sbjct 1116224 ATGGCACCTGGTCTCTTG-TTACCACCTTGATCCACATATCTAGCAGTACTGTTGAACAC 1116282
Query 106978 GCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATT 107037
|||| ||| ||||| ||||| | ||| |||||| || || |||| || | |
Sbjct 1116283 ACGAACCATCGGAATTATACCGTTGGATGTACCATTAGTACCGGCAATATACGAACCAGT 1116342
Query 107038 GGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACA 107097
|| | | | || ||||| | |||||||| ||||| ||| || || |||||
Sbjct 1116343 GGAACGAATGTTGTGAATGTGAAGACCAATACCACCAGCAGTCTTAGAAATCAAAGCACA 1116402
Query 107098 CTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCA 107157
|| | | ||| | |||||||| | || ||||| || || | || | | ||||||
Sbjct 1116403 CTGTTTCAAAGTATCGTAGATACCTTCAATAGAGTCATCTTTCATTGCAACTAAGAAGCA 1116462
Query 107158 ACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA 107217
|||||||| || | ||| |||||||||||||| | ||||||| ||| || ||||
Sbjct 1116463 TGATGACATCTGAGGGCGTGGAGTACCAGCATTGAACAACGTTGGTGATGCATGTGTGAA 1116522
Query 107218 CATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGA 107276
|| || | |||||| ||| |||| ||||| || | ||| || || || || |
Sbjct 1116523 -GTATCTCTTTGACATCAAGTCATATGATTCCAACACCTTAGGAATATCATCACCATGAA 1116581
Query 107277 TGCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTC 107316
| |||| |||||| | ||||| | || ||| ||| ||||
Sbjct 1116582 TACCGACGGCCACTCTCATAAGAAGGTGTTGTGGTCTTTC 1116621
>seq22
Length=1510904
Score = 134 bits (148), Expect = 2e-26
Identities = 300/442 (68%), Gaps = 10/442 (2%)
Strand=Plus/Minus
Query 106478 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAA 106537
||||| || || |||| ||||| || |||||| | || ||| || | |||||
Sbjct 295573 TTGCACACGGCGATCTCGTCCTTGGATGAGTACTCGACAACTTCGCAGCAGAGATTGGAC 295514
Query 106538 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGC 106597
||| || || || | ||||| || || ||| ||||||| |||||| || ||
Sbjct 295513 GACTTGATGGTTCCAAGGTTCTTCTGATTCGACTTCGCATTGCACGAATCCTTATAAAGG 295454
Query 106598 ATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCGGCT 106657
| | | ||||| || ||||| ||||| || | ||||| || |||||| | | |||
Sbjct 295453 AGGAAAGGCGTTCCTGTCTCGGTCTGAGAATAAAGAATCCTCTCCCACACCTTGCGGGCC 295394
Query 106658 GGTACAA-TGGCGTTGGC-CCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACT 106715
| ||| || ||| | ||| || || ||||||| |||||| |||| ||||||||
Sbjct 295393 --TTCAACTGCCGTAGATACCGGCCTTCTTTTTCGTACTGTGTGTACAGGGATTCAAACT 295336
Query 106716 CCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGAC--CATTG 106773
| |||| ||| || || |||||||| ||| | |||||||||||| ||
Sbjct 295335 CGGGACCCCATTTGTCTGATAGTCCTGGTGC--TGTATCCTCAGAAAAGAGACTCCACAT 295278
Query 106774 ACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 106833
|| | | || || ||| ||||||| ||||| |||||||||| | ||||||||||
Sbjct 295277 CTCATCGTTCTTCACACGCCTCATGAACAGGTCCGGAATCCACAACGCATAAAAGAGATC 295218
Query 106834 TCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAAC-TCAAGGAACTCCATGATAT 106892
|| ||| || || | || ||||| || | | || ||||| |||| ||||
Sbjct 295217 CCTTGCCCGCATTTCCTCCTTGCCGTGGTTCT-TCTTGAGGTCGAGGAATTCCAGAATAT 295159
Query 106893 CCGCGTGCCATGGCTCAAGATA 106914
|||| ||||| |||||||||||
Sbjct 295158 CCGCATGCCAGGGCTCAAGATA 295137
>seq3
Length=519016
Score = 89.7 bits (98), Expect = 6e-13
Identities = 133/186 (72%), Gaps = 2/186 (1%)
Strand=Plus/Plus
Query 9372 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 9431
|||||||||||||||| || ||||| ||||| |||||| | || | | ||| |
Sbjct 450355 GCATCAATCTCATCAACAAAAACAATGGATGGTGCATTTTCCCTTGCAGTCTTAAACAAC 450414
Query 9432 TCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACAT 9491
|| ||||| ||| || || ||||| |||||||| || || || | | | | ||| |
Sbjct 450415 TCACGAACTCTTGAAGCACCGACACCTACAAACATTTCAACGAATTCAGAGCCTGAA-AC 450473
Query 9492 TGGAT-GAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 9550
|| || ||| || || |||| |||||||||| | || || || | | ||| ||||| ||
Sbjct 450474 TGAATAGAATGGAACTTTAGCTTCACCCGCAGTTGCACGAGCCAACAAAGTTTTACCTGT 450533
Query 9551 ACCTGG 9556
||| ||
Sbjct 450534 ACCAGG 450539
>seq25
Length=757050
Score = 87.8 bits (96), Expect = 2e-12
Identities = 124/172 (72%), Gaps = 2/172 (1%)
Strand=Plus/Plus
Query 155044 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 155103
||||| | || |||||| |||| || | || ||||||||||||||||| |||||
Sbjct 282258 TATGGAAGAGTGGCACCAAGATCTGGATTAGCGGTGAAGCATGGTATTCATACCGGTGCT 282317
Query 155104 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 155163
||||| ||||| | ||||| | ||| ||||| || || || |||||||| | | ||
Sbjct 282318 GGTGTCATTGACTCAGACTACAGAGGAGAAGTTAAGGTTGTACTCTTCAACTTCAGCGAT 282377
Query 155164 AAAGACTTTGAG-GTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAG 155214
||||| ||| || | || || ||| | || |||||||| | ||||||
Sbjct 282378 AAAGA-TTTCAGCATTAACGCGGGTGATAGAATTGCACAACTCATTCTTGAG 282428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980593506720
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