Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq3 120 4e-22
>seq3
Length=519016
Score = 120 bits (132), Expect = 4e-22
Identities = 312/467 (67%), Gaps = 18/467 (4%)
Strand=Plus/Minus
Query 159316 GGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGA 159375
||| ||||||| ||||| | || || | | || | ||||||||||| |||||
Sbjct 366590 GGAGCACAGGGCGAGTACACGGGTCTTTCTGTCATTCGTGCATACCATCACTC--CAGGA 366533
Query 159376 --GATGATAAAAGAAATGTATGTTTGATACCAGAGTCAG--CACATGGAACTAATCCTGC 159431
|||| |||||||| || |||||| || | |||| |||| || || || || ||
Sbjct 366532 ATGATGCCAAAAGAAAGGTTGTTTTGATTCCTG--TCAGTGCACACGGTACAAACCCAGC 366475
Query 159432 ATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACAT 159491
|| || | ||||| || | |||||||| ||||| ||| ||| || || | |
Sbjct 366474 TTCTGCTGCAATGGCTGGTTTCAAAGTTGTGCCAGTCAAATGTCTTGAGGACGGAAGTTT 366415
Query 159492 AGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATG----TA 159547
|||| ||||| | |||||| |||| | | | | | ||| | || || |
Sbjct 366414 GAACATGGAAGATATGGAGAAGCAAGCCAAGAAGCACGC---TGA-CAATCTTGCCGCTT 366359
Query 159548 TTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAG-ACAGATATGT 159606
| ||||| ||||| ||| | || || | ||||| | ||| || || | ||
Sbjct 366358 TCATGATCACATACCCAACGACTTTCGGGCTTTTTGAGCCTGGCATTAGGACTGCAATAG 366299
Query 159607 AAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAG 159666
| ||||| || | |||| |||| || ||| | |||||||| || | ||||| |||
Sbjct 366298 AC-ATTGTGCACAAATATGGCGGTCTTGTCTATATGGATGGTGCTAACATGAATGCCCAG 366240
Query 159667 GTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAG 159726
|| || || | ||||| ||| | ||||||||| | || || | || | || |||
Sbjct 366239 GTTGGACTTACCTCACCATCTGATTTAGGTGCAGATCTTTGCCACTTGAATCTTCACAAG 366180
Query 159727 ACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTAT 159773
|||||||| ||||| ||||||||||| |||||||| || ||||| ||
Sbjct 366179 ACATTCTGCATTCCTCATGGAGGTGGCGGTCCTGGTGTGGGTCCAAT 366133
Score = 98.7 bits (108), Expect = 1e-15
Identities = 176/257 (68%), Gaps = 0/257 (0%)
Strand=Plus/Minus
Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502
||||| || ||| |||| ||||||| || || || | || ||||| | ||| | |
Sbjct 367487 CAAAGATTCGGTGTTCCAATGGGATTTGGTGGACCGTACGCAGCATTTATGGCAGTTAAA 367428
Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGT 158562
||| | ||||||||||| || || ||| |||| || ||| ||| || ||
Sbjct 367427 GACTCTTTAAAGAGAAAGATGCCAGGAAGACTTGTGGGCGTTTCAAAAGACAGACTTGGC 367368
Query 158563 AATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCA 158622
| ||| | || | || || |||||||| |||||||| ||||| ||||| |||||
Sbjct 367367 CACCCAGCTTTGAGGCTTGCTCTTCAGACTAGGGAGCAGCACATCAGGAGAGAGAAAGCC 367308
Query 158623 ACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCA 158682
|| ||| ||||| || ||||| ||||| |||| ||| | | | |||||| |
Sbjct 367307 ACTTCTAATATCTGTACTGCACAGGCACTTTTGGCCAATGTTGCATCTTCCTATGCTGTC 367248
Query 158683 TATCATGGTGCAGATGG 158699
||||||||| |||| ||
Sbjct 367247 TATCATGGTCCAGAAGG 367231
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588050994182080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |