Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq12 91.5 1e-13
seq1 86.0 4e-12
>seq12
Length=1682134
Score = 91.5 bits (100), Expect = 1e-13
Identities = 160/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 34752 TTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCC 34811
|| || || ||||| ||||| |||||||||| || || ||||| ||||| ||||||
Sbjct 1445796 TTACCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCC 1445855
Query 34812 GAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGC 34871
|| | ||| |||| |||| ||| || || ||||| || | || ||||| ||| |
Sbjct 1445856 GACAAAGTTCTGCCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGT 1445915
Query 34872 GGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCA 34931
|| | ||||||||||| ||||| || ||||| | || | || | |||
Sbjct 1445916 GGGATTCCCTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGACTCC 1445975
Query 34932 ACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
|| || | ||| || || || || || | |||||| || || || ||||| ||
Sbjct 1445976 ACCTCCAAGGTGATAGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCATTTT 1446028
>seq1
Length=1824870
Score = 86.0 bits (94), Expect = 4e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
||||| ||||| ||||| |||||||||| || ||| ||||||||||| ||||| ||
Sbjct 738152 CCTCCTCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAGTCAGAC 738093
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
| ||| |||| |||| ||| || || ||||| || | || || || || | ||
Sbjct 738092 AAAGTTCTACCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGGA 738033
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| |||||||| || ||||| || ||||| | || | || | ||| ||
Sbjct 738032 ATTCCCTCCTTATCCTGGATCTTTTGCTTGACATTGTCAATGGTATCGGAAGACTCCACC 737973
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
|| | ||| || || || ||||| | ||||| || || || ||||| ||
Sbjct 737972 TCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTT 737923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633489218784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |