Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq1 246 2e-59
seq25 122 6e-22
seq12 107 1e-17
seq7 104 2e-16
seq23 86.0 4e-11
>seq1
Length=1824870
Score = 246 bits (272), Expect = 2e-59
Identities = 480/700 (69%), Gaps = 8/700 (1%)
Strand=Plus/Plus
Query 475477 AGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTAC 475536
||| || ||| | | |||||||| |||||| | |||||| || | | ||||| || |
Sbjct 1567880 AGCTTTGAGAAGATTGAGAACTGCATGTGAAAGAGCTAAGAGAACATTGTCTTCATCTGC 1567939
Query 475537 TCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTAC 475596
|| || ||||||| | || ||| | ||||| || || || | | || |||||
Sbjct 1567940 ACAGACCTCTGTTGAGATCGACTCTTTGTTTGAGGGTATCGACTTCTACACATCAATTAC 1567999
Query 475597 AAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGA 475656
||||| | |||||| || |||| || ||||| || ||| || | || || || ||
Sbjct 1568000 GAGGGCAAGATTTGAGGAGCTTTGCTCAGATCTGTTCAGATCTACTCTGGACCCTGTCGA 1568059
Query 475657 ACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGG 475716
| | ||| | || |||||||| |||||||| || | | | || ||||| ||||| ||
Sbjct 1568060 AAAGGTTTTGAGGGATTCTAAGCTTGACAAGGCAAAGATTGACGAGATTGTGCTTGTTGG 1568119
Query 475717 AGGTTCAACAAGAATTCCAAA-AATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAA 475775
||||| |||||||||||||| | ||| || || |||| || ||||| |||||
Sbjct 1568120 TGGTTCTACAAGAATTCCAAAGGTTCAGA-AATTGGTTTCTGACTACTTTAACGGTAAGG 1568178
Query 475776 AGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAG 475835
|| || || | | || ||||||||||||||||| ||||| ||||| || || ||||
Sbjct 1568179 AGCCTAACAAATCTATCAACCCTGATGAAGCTGTTGCCTATGGTGCTGCAGTTCAGGCAG 1568238
Query 475836 CTATTTTATCAGGT--CAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAAC 475893
||||||| | ||| | || ||| | ||| | | | | | ||| | || || ||
Sbjct 1568239 CTATTTTGACTGGTGACGATTCCTCGA-AGACTCAGGACT-TGTTGCTTTTGGATGTTAC 1568296
Query 475894 TCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAA 475953
|| | || || ||| | || || | ||| || ||||||| || | ||| |||||
Sbjct 1568297 ACCTTTATCTTTGGGTATCGAGACCGCTGGTGGTGTTATGACAAAGTTGATTCCAAGAAA 1568356
Query 475954 TACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAAC 476013
| ||||||| ||||| || || || | || || |||||| | ||||| || ||
Sbjct 1568357 CTCCACTATCCCTTGCAAGAAGTCTGAAATCTTCTCTACTTATGCCGATAACCAGCCAGG 1568416
Query 476014 TGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGG 476073
||| || || | | ||||||||||||| | || || || || || | ||
Sbjct 1568417 TGTGTTGATTCAGGTGTACGAAGGTGAAAGAACAAGAACCAAGGACAACAATTTGTTGGG 1568476
Query 476074 AACTTTTAATCTTGA-AGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTA 476132
| || | |||| || || || || || || ||||| ||||| || ||||| ||||
Sbjct 1568477 TAAGTTCGA-GTTGACTGGAATCCCACCAGCACCAAGAGGGGTTCCACAGATTGAGGTTA 1568535
Query 476133 CTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGC 476172
|||||||||| ||||||||||||||| | || ||| ||||
Sbjct 1568536 CTTTTGATATCGATGCAAATGGTATTTTGAACGTTTCTGC 1568575
Score = 168 bits (186), Expect = 4e-36
Identities = 377/550 (69%), Gaps = 17/550 (3%)
Strand=Plus/Plus
Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGT-TTGGCAAAATGGTAA 474387
|| ||||| |||||||| || ||||| ||| ||||| | | || ||||| || |
Sbjct 1567119 GCTATTGGAATTGATTTGGGTACTACGTACTCATGTGTTGGTCACTTCGCAAA-TGACAG 1567177
Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447
||| || || |||||||| || |||||||| | || ||||| || ||||| |||| ||
Sbjct 1567178 AGTTGACATCATTGCCAACGATCAAGGTAACCGTACTACACCCTCTTATGTGGCTTTCAC 1567237
Query 474448 TGAAACTGA-ACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTA 474506
|| || || | || | ||||| || ||||| || | |||||||| |||||| |
Sbjct 1567238 AGACACCGAGAGAT-TGATTGGTGAGGCTGCCAAGAACCAAGCTGCGATGAATCCTTCCA 1567296
Query 474507 ATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACT--GTCCA 474564
| ||| | || ||||| |||||| | || ||| | || || || ||| || ||
Sbjct 1567297 ACACTGTCTTCGATGCAAAAAGACTTATAGGTAGAAAGTTCAGCGA--CCAGGAGGTGCA 1567354
Query 474565 ATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGA 474624
||||||| || ||||| || || || | | || ||||| ||| | || |
Sbjct 1567355 GAATGATATGAAGCACTGGCCATTCAAAGTCGTTGACTCTGAAGGTAAGCCAAAGATTCA 1567414
Query 474625 AGC--AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTT 474682
| |||||| | ||||| || || || |||| || | || || || ||||||
Sbjct 1567415 GGTTGAATACAAG--GGTGAGACAAAGGTCTTCACACCAGAGGAGATCTCATCTATGGTT 1567472
Query 474683 TTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAG-TAACTGATGCAG 474740
|| | ||||||| | ||||| ||| | || ||||| ||||| | | ||||| |
Sbjct 1567473 TTGACAAAAATGAGAACCACCGCCGAGG-CTTA-CTTGGGAGAGAAGGTGAAGGATGCTG 1567530
Query 474741 TAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAA 474800
| |||| |||||||| || || |||||||| || | || ||||| |||||||| || |
Sbjct 1567531 TGGTTACAGTTCCAGCTTACTTCAATGATTCCCAGAGACAGGCAACCAAAGATGCAGGTA 1567590
Query 474801 GAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTT 474860
|||||| || | ||||| | | || || ||||| || || ||||| || ||||||
Sbjct 1567591 CAATTGCTGGCATGAATGTGATGAGAATCATCAATGAGCCTACTGCAGCAGCTATTGCTT 1567650
Query 474861 ATGGTCTTGA 474870
||||| ||||
Sbjct 1567651 ATGGT-TTGA 1567659
Score = 109 bits (120), Expect = 4e-18
Identities = 150/206 (73%), Gaps = 3/206 (1%)
Strand=Plus/Minus
Query 480565 CAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAA 480624
|||| ||||| ||| ||| || || || || |||| | |||||| ||| || |
Sbjct 738132 CAAG-TGAAGAGTAGATTCCTTCTGAATGTTGTAGTCAGACAAAGTTCTACCATCCTCCA 738074
Query 480625 GTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAA 480684
||||| |||||||| || | | ||||||||||| |||||||| ||||| || || |
Sbjct 738073 ACTGCTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGGAATTCCCTCCTTATCCTGGA 738014
Query 480685 TCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTA 480743
||||||| |||||| ||||| ||||| | | | | | ||| ||| ||||| |||
Sbjct 738013 TCTTTTGCTTGACATTGTCAATGGTATCGGAAGACTCCACCTCCAA-GGTGATAGTCTTA 737955
Query 480744 CCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || | |||||||||||||||||
Sbjct 737954 CCCGTCAAGGTCTTAACGAAAATTTG 737929
>seq25
Length=757050
Score = 122 bits (134), Expect = 6e-22
Identities = 167/228 (73%), Gaps = 4/228 (2%)
Strand=Plus/Minus
Query 474648 AACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC-G 474706
|||| || ||||||| ||||| ||| | | | || | || ||||| || | ||| |
Sbjct 742515 AACACTTCACACCGGAGCAAATCTCTGCCCTCATCTTGGGAAAGATGAAGCAGATCGCCG 742456
Query 474707 AGCTCATATCTTGGACAAGAAG-TAACTGATGCAGTAATTACTGTTCCAGCATATTTTAA 474765
|| | ||||||||| |||||| | ||| |||| || |||||||||| |||||||| ||
Sbjct 742455 AGGAC-TATCTTGGA-AAGAAGGTTACTCATGCTGTCGTTACTGTTCCTGCATATTTCAA 742398
Query 474766 TGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACG 474825
||| | || | ||||||||||||||||| || | |||||||| | || ||| | |
Sbjct 742397 CGATGCCCAGAGACAAGCAACTAAAGATGCTGGTACGATTGCAGGCTTGAACGTTCTTAG 742338
Query 474826 TATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAA 474873
||| ||||||| || || || ||||| |||| || ||| | || ||
Sbjct 742337 AATTGTTAATGAGCCTACCGCTGCCGCTATTGCCTACGGTTTGGACAA 742290
Score = 98.7 bits (108), Expect = 6e-15
Identities = 251/378 (66%), Gaps = 12/378 (3%)
Strand=Plus/Minus
Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852
||||| |||||||||||||| ||||| || ||||| || |||| | || | || ||| ||
Sbjct 741763 AATCCGGATGAAGCTGTTGCCTATGGTGCGGCTGTTCAGGCAGGTGTTCTTTCTGGTGAA 741704
Query 475853 TCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTT 475912
|| | | | | ||||| | |||| || | ||| | | || ||| |
Sbjct 741703 GAAGGTG------TTGAGGACATTGTGTTGATTGATGTTAACCCATTGACTTTGGGTATC 741650
Query 475913 GAAACAGTTGGAGGGATTATGACTAATCTT-ATTGACAGAAATACTCCTATCCCATGCAA 475971
|| || ||| || | ||||| || ||| ||| | |||||||| ||||| ||| |||
Sbjct 741649 GAGACCTCTGGTGGTGTCATGAC-AACCTTGATTAAGAGAAATACACCTATTCCAACCAA 741591
Query 475972 AAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTT 476031
|| || | | || || ||| | |||||| || |||| || |||||| | |
Sbjct 741590 GAAGTCCCAGATTTTCTCTACTGCTGTTGATAACCAGCCAACAGTTCTCATCCAGGTTTA 741531
Query 476032 TGAAGGTGAAAGAAAATT--CACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAA 476089
||| || |||||| | | ||| |||| | ||| | || | || | ||| |
Sbjct 741530 TGAGGGAGAAAGAGCAATGGCACGTAAGA--ACAACTTGTTGGGTAAGTTCGAGCTTAAC 741473
Query 476090 GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCA 476149
||||||||||| ||||| ||||| |||||||| || || || || ||| | | || |
Sbjct 741472 GGTATTCCTCCGGCTCCAAGAGGCGTTCCTCAGATCGAGGTGACCTTTACTTTGGACTCC 741413
Query 476150 AATGGTATTCTTAATGTT 476167
||||| ||| | || |||
Sbjct 741412 AATGGAATTTTGAAGGTT 741395
>seq12
Length=1682134
Score = 107 bits (118), Expect = 1e-17
Identities = 123/163 (75%), Gaps = 2/163 (1%)
Strand=Plus/Plus
Query 480608 AGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAAT 480667
||||||| ||| || | ||||| |||||||| || | | || ||||| || || ||
Sbjct 1445861 AGTTCTGCCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGTGGGAT 1445920
Query 480668 TCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTT 480726
||| ||||||||||| |||||||| |||||| ||||| || || | | | | |
Sbjct 1445921 TCCCTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGACTCCACCTC 1445980
Query 480727 CAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||| ||| ||||| |||||||| | ||||||||||||||||||
Sbjct 1445981 CAA-GGTGATAGTCTTACCGGTCAAAGTCTTAACGAAAATTTG 1446022
>seq7
Length=196898
Score = 104 bits (114), Expect = 2e-16
Identities = 392/603 (65%), Gaps = 19/603 (3%)
Strand=Plus/Minus
Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTG--TTTGGCAAAATGGTA 474386
|||||||| ||||| || || || || ||| ||||| | | |||| ||| | |
Sbjct 83662 GCAATTGGAATTGACTTGGGTACCACCTACTCCTGTGTTGGTCACTTTGCCAAC--GACA 83605
Query 474387 AAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTA 474446
||| || || |||||||||||||| |||| ||||| || || || || ||| | || |
Sbjct 83604 GAGTTGACATCATTGCCAATGACCAGGGTAGCAGAACCACGCCTTCTTACGTTGCCTTCA 83545
Query 474447 CTGAAACTGA-ACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTT 474505
| || || || | || | || || || ||||| || | || ||||| || ||| |
Sbjct 83544 CCGATACCGAGAGAT-TGATCGGTGAGGCTGCCAAGAACCAGGCTGCCATGAACCCTACT 83486
Query 474506 AATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAA 474565
|| ||| | ||||| ||||| ||| | |||||| | || || || | || ||
Sbjct 83485 AACACTGTCTTTGACGCTAAGAGACTTATTGGTAGAAAGTTCACCGACCCAGAGGTTCAG 83426
Query 474566 TCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATAT--AG 474623
||||||| || ||||| || |||||||| | | || || ||| | || ||
Sbjct 83425 AGTGATATGAAGCACTGGCCATTCAAGGTGATCGACTCCGAGGGAAAGCCAAAGATCCAG 83366
Query 474624 AAGCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTT 474683
| |||| | || || || || | | || || | |||| || ||||||
Sbjct 83365 GTCGAGTACAAG--GGCGAGACCAAGGTCCTCACTCCAGAGGAGGTTTCCTCTATGGTTC 83308
Query 474684 TAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAA-GTAACTGATGCAGTA 474742
| ||| |||| | | || || | | | |||| || || || | || || ||
Sbjct 83307 TCAGCAAGATGAGAGAGACTGCCGAAGCCT-TTTTGGGCAGCAAGGTTAAGGACGCTGTT 83249
Query 474743 ATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGA 474802
|||| || ||||| || || ||||| || || | || || || || ||||| || |
Sbjct 83248 GTTACCGTCCCAGCCTACTTCAATGACTCCCAGAGACAGGCTACCAAGGATGCCGGTACC 83189
Query 474803 ATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862
||||| ||| | || || | | || || || || ||||| || ||||| |||| ||
Sbjct 83188 ATTGCCGGTATGAACGTGATGAGAATCATCAACGAGCCAACCGCTGCCGCTATTGCCTAC 83129
Query 474863 GGTCTTGATAAGAATTCTGA--CAAAGAAGTAAATGTTTTAATCTTTGATT---GTGGAG 474917
||| | |||||||| | || ||||| || || || ||||| |||| ||||||
Sbjct 83128 GGTTTGGATAAGAAGACCGAGGGTGAGAAG--AACGTCTTGATCTTCGATTTGGGTGGAG 83071
Query 474918 GTA 474920
|||
Sbjct 83070 GTA 83068
>seq23
Length=1344041
Score = 86.0 bits (94), Expect = 4e-11
Identities = 206/303 (68%), Gaps = 9/303 (3%)
Strand=Plus/Minus
Query 355401 TGTGAAGATATATCGTGCACTTGCATTATCTTTGCCTCCACTTAA--TCTTGTACCAAAT 355458
|||||||||||| | |||| ||| ||| || ||||| | || ||||| ||||||
Sbjct 685854 TGTGAAGATATACCTTGCAGCTGCTGCATCCTTACCTCC--TGAAGCTCTTGAACCAAAA 685797
Query 355459 TGACCAT-TGGGAAGTAATAAATTTATGTTGTTACTTCCAACATAATTTTGTGCCATTTT 355517
||||| |||||| || || || ||||||||| ||||||| ||| ||| || |
Sbjct 685796 CCACCATGTGGGAAC-AACAAGTTGATGTTGTTAGATCCAACAAAATCTTGAGCAAGAGA 685738
Query 355518 TATTATAGTTTCAGTCATTGACTGTTCTCCATGATGATATTTAGTTCTTTTCGAAACTGC 355577
|| || |||| | ||| ||| || ||||||||||| ||| || | ||
Sbjct 685737 AATAATGGTTTGAATCAATGATGCATCACCATGATGATAACCAGTATGTTCTGCAATATA 685678
Query 355578 ACCTTGTAATTCAGATACTTTAATTTCTTCTTTATAAATACCTTCTTCCTCTGAACCATA 355637
||||| ||||| || ||||| || || | ||||| | |||| | | ||| |
Sbjct 685677 ACCTTCTAATTGGGAAACTTTTATCTC-ACCCCGTAAATTTC-TCTT-ATAGCATCCAAA 685621
Query 355638 CAATACTTTTCTTTGAGATGGTTTAAGACCGTCAGCTATGTTAGGTATTGATCTCATATT 355697
||| | ||||||||||||||| || | ||| || ||| ||| ||||| | || ||
Sbjct 685620 CAAAATTTTTCTTTGAGATGGCTTGAAACCATCCACTACCGAAGGAATTGAACGAATGTT 685561
Query 355698 ATC 355700
|||
Sbjct 685560 ATC 685558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268177998944144
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |