Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq12 114 7e-21 >seq12 Length=1682134 Score = 114 bits (126), Expect = 7e-21 Identities = 288/435 (66%), Gaps = 2/435 (0%) Strand=Plus/Plus Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989 || ||||||||||||||||||||| | || ||| ||||| | || | || || || Sbjct 1116094 CTTCATAAATAAATCTGGAATCCAAAGAGCTGGAAACAAATCACGTGCACGAATCTCCTC 1116153 Query 25990 TTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAA 26049 ||| || ||||||||| | | ||| | || || || ||||| | ||||| || || || Sbjct 1116154 TTTACCATGATTCTTTCTGATATCGATAAAGTCGAAGATATCAGCATGCCAAGGCTCCAA 1116213 Query 26050 ATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTC 26109 || ||||||| |||| ||| || ||||||||||| || ||||| ||||| Sbjct 1116214 GTAAATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGATCCACATATCTAGCAGTACT 1116273 Query 26110 ATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAAT-CCGTTTGTGCTATGAATCT 26168 ||||| || | ||| |||| | || | |||| | | || || || | ||| | Sbjct 1116274 GTTGAACACACGAACCATCGGAA-TTATACCGTTGGATGTACCATTAGTACCGGCAATAT 1116332 Query 26169 TGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAA 26228 || || || || | ||| | |||| |||| ||| || |||||||| || |||| Sbjct 1116333 ACGAACCAGTGGAACGAATGTTGTGAATGTGAAGACCAATACCACCAGCAGTCTTAGAAA 1116392 Query 26229 TAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTA 26288 | ||||| | | | |||||| | || |||| || ||| |||||||| | | Sbjct 1116393 TCAAAGCACACTGTTTCAAAGTATCGTAGATACCTTCAATAGAGTCATCTTTCATTGCAA 1116452 Query 26289 ATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAG 26348 ||| || || || || | || | | | || || | ||| || || || |||| | Sbjct 1116453 CTAAGAAGCATGATGACATCTGAGGGCGTGGAGTACCAGCATTGAACAACGTTGGTGATG 1116512 Query 26349 CATGAGTATAATATC 26363 |||| || | |||| Sbjct 1116513 CATGTGTGAAGTATC 1116527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039913650100