Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq12 239 5e-58 seq22 114 2e-20 seq25 87.8 2e-12 >seq12 Length=1682134 Score = 239 bits (264), Expect = 5e-58 Identities = 928/1434 (65%), Gaps = 41/1434 (3%) Strand=Plus/Minus Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 |||| ||||| || | | ||| | || || |||| || || || || || ||| | Sbjct 1116621 GAAAGACCACAACACCTTCTTATGAGAGTGGCCGTCGGTATTCATGGTGATGATATTCCT 1116562 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAAC 75324 || ||||| |||| ||| |||||| | || || |||| || ||| ||||||| Sbjct 1116561 AAGGTGTTGGAATCATATGACTTGATGTCAAAGAGATAC-TTCACACATGCATCACCAAC 1116503 Query 75325 CCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAA 75384 | |||||||||||||| ||| | || |||||||| |||||| | | || | || Sbjct 1116502 GTTGTTCAATGCTGGTACTCCACGCCCTCAGATGTCATCATGCTTCTTAGTTGCAATGAA 1116443 Query 75385 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 75444 || ||||| || | |||||||| | ||| | | ||||||| || || ||| Sbjct 1116442 AGATGACTCTATTGAAGGTATCTACGATACTTTGAAACAGTGTGCTTTGATTTCTAAGAC 1116383 Query 75445 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 75504 ||||| |||||||| | ||||| || | | | ||| | || |||| || Sbjct 1116382 TGCTGGTGGTATTGGTCTTCACATTCACAACATTCGTTCCACTGGTTCGTATATTGCCGG 1116323 Query 75505 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 75564 || |||||| ||| | ||||| ||||| ||| |||| || || ||| || || | Sbjct 1116322 TACTAATGGTACATCCAACGGTATAATTCCGATGGTTCGTGTGTTCAACAGTACTGCTAG 1116263 Query 75565 CTATGTAAATCAAGCGGGGCGTCGCAAG------GGGTCCATCGCGGTCTACTTGGAACC 75618 ||||| ||||| || || |||| || |||| || | |||||||| || Sbjct 1116262 ATATGTGGATCAA---GGTGGTAACAAGAGACCAGGTGCCATTGCTATTTACTTGGAGCC 1116206 Query 75619 ATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGC 75678 |||||||| |||||| | || || | || | || || || ||| | || ||| Sbjct 1116205 TTGGCATGCTGATATCTTCGACTTTATCGATATCAGAAAGAATCATGGTAAAGAGGAGAT 1116146 Query 75679 TCGGTGTA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTG 75737 || ||| | | ||| | ||| || | || ||||||||||| | || |||||||| || | Sbjct 1116145 TC-GTGCACGTGATTTGTTTCCAGCTCTTTGGATTCCAGATTTATTTATGAAGCGTGTGG 1116087 Query 75738 AGGAGGGTGGTCAA-TGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCG 75796 | ||| | ||| ||| | | |||| ||| |||||||||||||||| || | Sbjct 1116086 A-GAGCAACGACAAGTGGACATTGTTCTCTCCTTCTGAGGCACCAGGTCTCTCAGATGTT 1116028 Query 75797 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCG 75856 ||||| ||||| || | ||||| || || | || || | | | Sbjct 1116027 TACGGTGACGAGTTCGAGAAATTGTACACTCGTTACGAGAAAGAAGGACGTGGAAGAAGA 1115968 Query 75857 ACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915 || || || | | || ||| ||| | ||| | | | ||||| || ||||| || Sbjct 1115967 ACAGT-GAAGGCTCAGAAGTTATGGTACCAGATTTTGGAGGCTCAGACAGAAACTGGTAC 1115909 Query 75916 ACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAAC 75975 ||| | ||| | ||||||||||||||||| | |||||||| || ||||| ||||| || Sbjct 1115908 ACCTTTCATGATCTACAAGGATGCTTGTAATAGAAAGAGTAATCAGAAGAACTTGGGTAC 1115849 Query 75976 AATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035 ||||| || || | ||| || || | |||||| | | |||||| | Sbjct 1115848 CATCAAATCTTCGAACTTGTGCTGTGAGGTTGTCGAGTACTCCTCTCCAGATGAGGTTGG 1115789 Query 76036 TGTTTGCAATTTGG-CATCAATCG---CCCTTCCAAAG-TATGTCA-ATGAAGAGACTCG 76089 ||| || || |||| || || | | ||| || | | |||| |||| || | | Sbjct 1115788 TGTGTGTAACTTGGCCAACATTTGTTTGCCTGCCTTTGTTGAGTCAGATGAGGATCATTG 1115729 Query 76090 CACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCG 76149 | || | | || || | || | || || || |||||||| || ||||||| Sbjct 1115728 CTGGTTCAACTTCGAGAAGTTGCACAAGATTACTAAAGTTGTTACCCGTAACTTAAACCG 1115669 Query 76150 AGTCATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACA 76206 || ||||||||||||| ||||| || |||| || || || || || ||| || | Sbjct 1115668 TGTTATTGACAGAAATTACTATCCAGTTCCTGAG---GCCCGTAACTCCAACATGAGAAA 1115612 Query 76207 CAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTG-TGCCGCTACG 76265 ||||||||||| | | ||| | || ||||| || ||| || | || | |||| Sbjct 1115611 CAGACCTATTGCTCTTGGTATCCAGGGTCTTGCTGATACCTTCTTCATGCTTAGACTAC- 1115553 Query 76266 CATTTGA---TTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATC 76322 | ||||| | ||||| || |||| | || || || ||||| ||| |||||| Sbjct 1115552 CTTTTGACTGTCCAGAT---GCACGGGAGCTTAACATTCAGATATTTGAGACCTTGTATC 1115496 Query 76323 ACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTG 76382 |||| | |||||| | | |||| | | ||| | ||| |||||| || Sbjct 1115495 ACGCTGCATTGGAGGAATCCAACCAGCTTGCTGTGGAAGAGGGTACTTATCAGACATATG 1115436 Query 76383 AGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAA-- 76440 | || ||||| || || | || | || || | |||||||| |||| || || | Sbjct 1115435 AAGGCTCTCCAGCTTCAAAGGGTATTCTACAATATGATATGT-GGAACAAAAAGCCTACG 1115377 Query 76441 GCTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAG 76500 | || | ||||||||| ||| |||| || ||| |||||| | ||| Sbjct 1115376 GATC-TGTGGGACTGGGATACTCTGAAGGCTAAGATTGCCAAGACTGGTCTTAGAAACTC 1115318 Query 76501 TCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 76560 ||||||| ||||||| ||||| || || || || | || || ||||| |||| ||||| Sbjct 1115317 TCTTTTGGTGGCACCTATGCCGACTGCTTCTACTTCCCAGATTATGGGTTATAACGAATG 1115258 Query 76561 CTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTT 76614 || ||||||| ||| | |||||||| | ||||||| || || ||||| || Sbjct 1115257 TTTCGAACCATTCACCTCTAACATCTATCAGAGAAGAGTTCTTGCTGGTGAATT 1115204 >seq22 Length=1510904 Score = 114 bits (126), Expect = 2e-20 Identities = 859/1357 (63%), Gaps = 68/1357 (5%) Strand=Plus/Plus Query 75614 GAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTT-ACGACTCAACCAAGGTGACGA 75672 || || |||||||| ||||| |||| ||||| || | | || ||||| || | || Sbjct 295143 GAGCCCTGGCATGCGGATATTCTGGAATTCCTCGACCTCAAGAAG-AACCACGGCAAGGA 295201 Query 75673 AGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCG 75732 || ||| || |||||||||| | |||||||||| ||||| ||||||| ||| Sbjct 295202 GGAAATGCGGGCAAGGGATCTCTTTTATGCGTTGTGGATTCCGGACCTGTTCATGAGGCG 295261 Query 75733 GGTTGAGGAGGGTGGTCAATGG--TCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCC 75790 || || | | || ||| ||||||||||| | ||| |||||||| || || Sbjct 295262 TGTGAAGAACGATGAGATGTGGAGTCTCTTTTCTGAGGATACA--GCACCAGGACTATCA 295319 Query 75791 GACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCC 75850 ||| |||| ||||||||| |||| |||||| |||| ||| | || || | | Sbjct 295320 GACAAATGGGGTCCCGAGTTTGAATCCCTGTACACACAGTACGAAAAAGAAGGCCG-GTA 295378 Query 75851 AATGCGACTGTACCAGCCGC-CGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGAC 75909 | || | || || | | | | || ||| || ||||| | || ||||| ||||| Sbjct 295379 TCTACGGCAGTTGAAGGCCCGCAAGGTGTGGGAGAGGATTCTTTATTCTCAGACCGAGAC 295438 Query 75910 TGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTT 75969 ||||| || | | ||||| |||||| | || || |||| || || ||||| | Sbjct 295439 AGGAACGCCTTTCCTCCTTTATAAGGATTCGTGCAATGCGAAGTCGAATCAGAAGAACCT 295498 Query 75970 GGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGA 76029 ||||| |||||| || ||||| ||| ||| || | |||||| || ||||| || Sbjct 295499 TGGAACCATCAAGTCGTCCAATCTCTGCTGCGAAGTTGTCGAGTACTCATCCAAGGACGA 295558 Query 76030 GACGGCTGTTTGCAAT-TTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGA--- 76085 || || || ||||| ||||| || | | | || | || ||| | || || | Sbjct 295559 GATCGCCGTGTGCAACCTTGGC-TCTGTTGGGTTGCCGATGTTTGTGGAGGAGGAAAACG 295617 Query 76086 ------CTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAA 76139 || | | ||| | || || || || | | || || | || | Sbjct 295618 ACGGTACTAGGAGTTTCAACCTGGAGAAGCTCCACCAGGTGGTGAAAGTTCTCGTGAAGA 295677 Query 76140 ATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGC-GAAAGTCTAAT 76198 | || ||||| || || || | || || ||||| | | || ||| ||| ||| Sbjct 295678 ACCTCAACCGGGTTATCGATGTGGGTGCATACCCGCTTGAG-CAGTGCAGAACGTCAAAT 295736 Query 76199 ATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGC 76258 | | | || | || |||| | ||||||||||| | || |||| ||| || | || Sbjct 295737 ACGAGGCATCGTCCGATTGCAGTCGGTGTTCAAGGATTAGCAGATGC-TTTCTTCAG-GC 295794 Query 76259 CGCTACG--CATTTG--ATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAAC 76314 | | |||||| | || | | || | || |||| | |||||| | || Sbjct 295795 TGAGGTGTCCATTTGGAAGTCCGT--ACTCCCGGAAGTTGAACAAGCAAATCTTTCAGAC 295852 Query 76315 CATGTATCACGCATCCCTGGAGGCGAGT-TGTGAA-TTGGCTGAAGCCCAAGGTTCCTAT 76372 || || || ||| |||| ||| ||| |||| | |||||| | | || | ||| Sbjct 295853 GATCTACCATGCAGCCCTTGAGC--AGTCTGTGGAGTTGGCTCAGAAAGACGGCCCATAT 295910 Query 76373 GAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGT 76432 ||| ||||| || || || | || ||||| || ||||||| ||||||||||| | | Sbjct 295911 TCGACGTTTGAAGGCTCGCCAGGCTCGCAAGGTGTTCTTCAGTATGATATGTGGGGCG-T 295969 Query 76433 GAAACC--AAGCTCAACTAC----------GACTGGGATGTTCTCAAGGAACGCATCAAG 76480 ||| || ||| ||| | || ||||| | ||| || | ||| || Sbjct 295970 GAAGCCGGAAGA--AACGAGAAGTCTGTGGGATTGGGAAGGTCTTAAAGCTAAGATCGAG 296027 Query 76481 -GAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACA 76539 | | |||| | | ||| || | ||||| ||||| || || || || | || Sbjct 296028 CGGGTCGGGT-TAAGGAACTCGCTCCTAGTGGCATTGATGCCGACGGCTTCTACATCGCA 296086 Query 76540 AATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAAC 76599 |||||||| | |||||||| |||||| |||| | || |||||| || ||| Sbjct 296087 GATCTTGGGATTCACCGAATGCTTCGAACCAATCACATCCAATATCTACACCAGGAGAGT 296146 Query 76600 CCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGG 76659 ||| | |||||| | || ||| | ||||| || | || || | ||| | || Sbjct 296147 CCTTTCCGGTGAGCACCAGGTGGTAAACTCGTACCTCATCGACGATCTTGACAAGTTGGG 296206 Query 76660 TCTCTGG---TCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAA 76716 |||||| ||| ||| |||||||| | || | || ||| ||||| || | Sbjct 296207 GCTCTGGAACTCC--GGA-ATGAAGGACCAGATTATTGCCGCCAATGGATCCATCCAGGA 296263 Query 76717 TATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAAT----CA 76772 ||| ||| ||||| || | |||||| | || ||| ||||| ||||| || || Sbjct 296264 TATTGCAGGCATCCCGGAAAACATCAAGCAGCTTTACAAAACAGTCTGGGACATGTCTCA 296323 Query 76773 AGATGAAAGATG-TCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAA 76831 | ||||| |||| || ||||| || || |||| | || | | || ||| || Sbjct 296324 A-----AAGATCATCATCGATATGGCAGCGGACCGTGCACCCTACGTGGACCAATCGCAG 296378 Query 76832 AGTATGAATCTATTCATGGAA-AGTCCAACGATGTCCAAGCTCTCTTCTATGCATATGTA 76890 ||||||||||| ||| || || | | || || || | ||| | | |||||| | || Sbjct 296379 AGTATGAATCTCTTCTTGAAAGACTGCA-CGCTGGCAAAGATGACCAGTATGCACTTCTA 296437 Query 76891 CGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTAT 76927 |||||| || |||| | || || |||||||||||| Sbjct 296438 TGCGTGGGAAAAGGGCTTGAAGACTGGAATGTACTAT 296474 >seq25 Length=757050 Score = 87.8 bits (96), Expect = 2e-12 Identities = 124/172 (72%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 27861 CTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTAC-CTCAAAGTCTTTGTCTCCGT 27919 |||||| | |||||||| || | ||| || || | || ||| ||||| || | | Sbjct 282428 CTCAAGAATGAGTTGTGCAATTCTATCACCCGCGTTAATGCTGAAA-TCTTTATCGCTGA 282370 Query 27920 GATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACCAA 27979 |||||||| || || || ||||| ||| | ||||| | ||||| ||||| ||||| Sbjct 282369 AGTTGAAGAGTACAACCTTAACTTCTCCTCTGTAGTCTGAGTCAATGACACCAGCACCGG 282310 Query 27980 CTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCAACACGACCATA 28031 ||||||||||||||||| || | || |||| |||||| || | ||||| Sbjct 282309 TATGAATACCATGCTTCACCGCTAATCCAGATCTTGGTGCCACTCTTCCATA 282258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569391200640