Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq1 131 3e-25 seq12 116 7e-21 >seq1 Length=1824870 Score = 131 bits (144), Expect = 3e-25 Identities = 174/242 (72%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 || ||||| ||||| | || || || || || | ||||| || || ||| || || Sbjct 738158 ATGATACCTCCTCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAG 738099 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 || || |||| || | || ||||| || ||||||||||| || ||||||||||| ||| Sbjct 738098 TCAGACAAAGTTCTACCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGATCA 738039 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 ||||| ||||| || ||||| || || || | || ||||| || ||||| || || Sbjct 738038 GGTGGAATTCCCTCCTTATCCTGGATCTTTTGCTTGACATTGTCAATGGTATCGGAAGAC 737979 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATTA 172076 || || || | || || || ||||| || || || |||| ||| || |||||||| || Sbjct 737978 TCCACCTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTTTCTA 737919 Query 172077 TA 172078 || Sbjct 737918 TA 737917 >seq12 Length=1682134 Score = 116 bits (128), Expect = 7e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 171841 TACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTG 171900 |||||||||| | || || || || || | ||||| ||| || || || || || | Sbjct 1445797 TACCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCG 1445856 Query 171901 ATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTG 171960 | |||| || | || ||||| || ||||||||||| || |||||||| || || |||| Sbjct 1445857 ACAAAGTTCTGCCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGTG 1445916 Query 171961 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTA 172020 | ||||| || || ||||| || || | || ||||| || || || || || || | Sbjct 1445917 GGATTCCCTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGACTCCA 1445976 Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 | || | || || || ||||| || || || |||| ||| || |||||||| Sbjct 1445977 CCTCCAAGGTGATAGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCATTTT 1446028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135683202400