Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq12 226 8e-54
seq3 111 5e-19
seq4 96.9 1e-14
>seq12
Length=1682134
Score = 226 bits (250), Expect = 8e-54
Identities = 599/906 (66%), Gaps = 9/906 (1%)
Strand=Plus/Plus
Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689
||| || |||| ||||||||||| ||| ||| |||||||| || || |||||||| ||
Sbjct 1115809 GTACTCGACAACCTCACAGCACAAGTTCGAAGATTTGATGGTACCCAAGTTCTTCTGATT 1115868
Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749
| || || ||||||||||||||||| | ||| | || || || || || |||| ||
Sbjct 1115869 ACTCTTTCTATTACAAGCATCCTTGTAGATCATGAAAGGTGTACCAGTTTCTGTCTGAGC 1115928
Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATT-TGCTTGTTGTATCTGCCTTCCG 155808
|||| ||||| ||| | | | || || | | | ||| || | | |||||
Sbjct 1115929 CTCCAAAATCTGGTACCATAACTTCTGAGCCTTCACTGTTCTTCTTCCACGT-CCTTCTT 1115987
Query 155809 ACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGC 155868
||| || | |||| | | | || ||||||||| ||| || || ||
Sbjct 1115988 TCTCGTAACGAGTGTACAATTTCTCGAACTCGTCACCGTAAACATCTGAGAGACCTGGTG 1116047
Query 155869 ACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACAT 155928
|| | || | |||| | ||| | | || | ||||||| |||||||| ||
Sbjct 1116048 CCTCAGAAGGAGAGAACAATGTCCACTTGTCGTTGCTCTCCACACGCTTCATAAATAAAT 1116107
Query 155929 CACTCGCCCAAATAGCATAGAAA-AGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTC 155987
| ||||| ||| | |||| | || | ||| |||||| | || ||||||
Sbjct 1116108 CTGGAATCCAAAGAGC-TGGAAACAAATCACGTGCACGAATCTCCTCTTTACCATGATTC 1116166
Query 155988 TTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAA 156047
|| | | || | || || ||||||| ||| ||||||| || |||||||
Sbjct 1116167 TTTCTGATATCGATAAAGTCGAAGATATCAGCATGCCAAGGCTCCAAGTAAATAGCAATG 1116226
Query 156048 CTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCT 156104
||| |||||| ||||| ||||| ||||| | |||||| | ||||| ||||
Sbjct 1116227 GCACCTGGTCTCTTGTTACCACCTTGATCCACATATCTAGCAGTACTGTTGAACACACGA 1116286
Query 156105 AGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAG 156164
| ||| ||||| ||||| ||||| || ||||| || ||| ||||| |||||||| ||
Sbjct 1116287 ACCATCGGAATTATACCGTTGGATGTACCATTAGTACCGGCAATATACGAACCAGTGGAA 1116346
Query 156165 CGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCC 156224
|||| || ||||| || || ||||||||||| | |||||||| ||| || |
Sbjct 1116347 CGAATGTTGTGAATGTGAAGACCAATACCACCAGCAGTCTTAGAAATCAAAGCACACTGT 1116406
Query 156225 TTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAA 156284
|| | ||||| | | |||||||||||||| ||||||| ||||| | || |||| ||
Sbjct 1116407 TTCAAAGTATCGTAGATACCTTCAATAGAGTCATCTTTCATTGCAACTAAGAAGCATGAT 1116466
Query 156285 CTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATAC 156344
| ||||| ||||| || ||||| ||||| | || |||| |||||| | || ||
Sbjct 1116467 GACATCTGAGGGCGTGGAGTACCAGCATTGAACAACGTTGGTGATGCATGTGTGAAGTAT 1116526
Query 156345 TTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAG 156404
| || ||||| | || |||| ||| | ||| || || | || ||||||| |
Sbjct 1116527 CTCTTTGACATCAAGTCATATGATTCCAACACCTTAGGAATATCATCACCATGAATACCG 1116586
Query 156405 ATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGA 156464
| | || ||||| | || || || | || ||| | |||| ||||| ||
Sbjct 1116587 ACGGCCACTCTCATAAGAAGGTGTTGTGGTCTTTCAGCAACCTTACCATTAATTCTCAAC 1116646
Query 156465 AGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA-ATCAAACAGAAAATCACGGTTGTA 156523
|| || | ||||||| ||| || || || || || | ||| | || ||||||| |||
Sbjct 1116647 AGATAAGAACGTTCCAAAGTCTTGAAACCAAAGTAGTTGTAACTG-AAGTCACGGTCGTA 1116705
Query 156524 ATCAAT 156529
|| |||
Sbjct 1116706 ATTAAT 1116711
>seq3
Length=519016
Score = 111 bits (122), Expect = 5e-19
Identities = 220/321 (69%), Gaps = 6/321 (2%)
Strand=Plus/Plus
Query 289027 TTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086
||||| | ||||||||| || |||| |||| | | || | ||||| || ||| |
Sbjct 450346 TTACCGATAGCATCAATCTCATCAACAAAAACAATGGATGGTGCATTTTCCCTTGCAGTC 450405
Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146
||| || || | || | || || || | ||| ||| ||||||| || ||||||||
Sbjct 450406 TTAAACAACTCACGAACTCTTGAAGCACCGACACCTACAAACATTTCAACGAATTCAGAG 450465
Query 289147 GCGGATACTTGAAT-GAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGT 289205
| || ||| |||| ||||| || || ||||| || || ||| | |||| | ||
Sbjct 450466 CCTGAAACT-GAATAGAATGGAACTTTAGCTTCACCCGCAGTTGCACGAGCCAACAAAGT 450524
Query 289206 CTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGA 289265
|||||||| ||||||||||| |||| | || ||||| || || || ||
Sbjct 450525 TTTACCTGTACCAGGTGGTCCACACAATATCGCACCACGTGGTATCTTAGCTCC--CAAC 450582
Query 289266 CTT--ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCC 289323
||| |||| ||| ||| ||||||||| | |||| |||| || || | ||||||
Sbjct 450583 CTTTCATATCTCTGCGGGTCCTTTAAAAAGTTGACAAATTCCAGAATCTCTTCTTTTGCT 450642
Query 289324 TCATCACATCCTGCTACATCA 289344
|||||||| || || ||||||
Sbjct 450643 TCATCACAACCAGCGACATCA 450663
>seq4
Length=428324
Score = 96.9 bits (106), Expect = 1e-14
Identities = 212/314 (68%), Gaps = 4/314 (1%)
Strand=Plus/Minus
Query 302565 CATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTT 302624
||| ||||| |||| ||||| || || ||||| || || || || | || ||
Sbjct 58085 CATGATGTCCTCCAATGCCTTGACCAACCGCCGCTGGATGTATCCGGTCTCTGCGGTCTT 58026
Query 302625 TACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684
|| || || || || | || |||| || |||| ||||||||||| | ||| | |||
Sbjct 58025 CACGGCCGTGTCGATCAACCCCTCACGGCCTGCCATCGCATGGAAGAACAACTCCTGCGG 57966
Query 302685 TCGT--AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCG 302742
| || |||| | ||| | | || |||| |||||||| | ||||| ||| | ||||
Sbjct 57965 T-GTCAAGCCTCGCAAGTACG-AGTTCTCGACGAAACCCTTGGACTCGGCCGAGTAGTCG 57908
Query 302743 AACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCA 302802
||| || ||||| |||| | | || | | | ||| | ||| ||||| || ||
Sbjct 57907 TCCTTCGTGAAGTGCGGCAACGAGCGGTCCGCGAACCCGAAGTTGATCCGCTTACCTTCG 57848
Query 302803 ACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAG 302862
||| ||||||| |||| |||| ||||||||| || || | | ||||||||||
Sbjct 57847 ACGATCTGCTGGCCCACACACGCCGACATCTGCGAGATGTTGATGTACGAGCCCTTGGAG 57788
Query 302863 CCAGCATTTACCAT 302876
|| || | |||||
Sbjct 57787 CCTGCCGTCACCAT 57774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817071985436
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |