Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq4 113 6e-19 seq22 87.8 2e-11 >seq4 Length=428324 Score = 113 bits (124), Expect = 6e-19 Identities = 209/300 (70%), Gaps = 10/300 (3%) Strand=Plus/Plus Query 507589 CGGGTGGTCGGTCGAGCGCCACCTGCGCGCGGGCGACGCCGTGGTGATGAACCGGCAGCC 507648 ||||||| || ||||| ||| || | |||||| | ||| | | ||| ||||||| Sbjct 56828 CGGGTGGAAAGTGGAGCGGCACTTGATGGACGGCGACCCGGTGCTTTTCAACAGGCAGCC 56887 Query 507649 GTCGCTGCACATGGGCTCCATGCTCATGCACAAGGTGGTGCCCATGCCCGGGCGCACCAT 507708 |||||| |||| | || ||| | ||||||||| | ||||| | | | | | Sbjct 56888 GTCGCTTCACAAGATGTCGATGATGTGCCACAAGGTGCGGGTGATGCC-GTTCTCGACGT 56946 Query 507709 GC-GATTCAACCTGGCCGTCACGGGCACCTACAACGCCGACTTTGACGGCGACGAGATGA 507767 | | ||||| || | || ||| |||||||||||||||| ||||| |||||||||| Sbjct 56947 TCAGGATCAACTTGTCGGTGACGACGCCCTACAACGCCGACTTCGACGGTGACGAGATGA 57006 Query 507768 ACCTGCACGTGCCCCAGTC---CGAGACGGCGCGCGCCGAGGTGACGCACACCATGAGC- 507823 || ||||||| || ||||| ||||||| | || ||| || | | | | || || Sbjct 57007 ACATGCACGTCCCGCAGTCGTACGAGACGAAG---GCAGAGTTGGAGGAGATC-TGTGCG 57062 Query 507824 GTGTCGCTCAAGACCGTGTCGCCGCAGGCCAACAAGCCCATCATCGGCCTGGTCATGGAC 507883 ||| | ||| ||||||||||||| |||||||||| |||| ||| | ||| |||| Sbjct 57063 GTGCCAAGGCAGATCGTGTCGCCGCAGTCCAACAAGCCGGTCATGGGCATTGTCCAGGAC 57122 >seq22 Length=1510904 Score = 87.8 bits (96), Expect = 2e-11 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524 |||||| || |||||||| || | ||||| | |||||||||||||||||||| |||| Sbjct 295239 TCCACAACGCATAAAAGAGATCCCTTGCCCGCATTTCCTCCTTGCCGTGGTTCTTCTTGA 295180 Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTA 1628567 ||||||| | || | ||| || || ||||| ||||| || || Sbjct 295179 GGTCGAGGAATTCCAGAATATCCGCATGCCAGGGCTCAAGATA 295137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107136902188876