Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq12 140 3e-28
seq1 140 3e-28
>seq12
Length=1682134
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || |||| || | |||||||| ||||| || | || || || | ||
Sbjct 1446025 ATGCAAATTTTCGTTAAGACTTTGACCGGTAAGACTATCACCTTGGAGGTGGAGTCTTCC 1445966
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||||||||||||||| || ||||| || || |||||
Sbjct 1445965 GACACCATTGACAATGTCAAGCAAAAGATCCAAGACAAGGAGGGAATCCCACCAGATCAG 1445906
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||||||||| || || ||| |||||||| |||| |||| || || |||
Sbjct 1445905 CAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCGGACTACAAC 1445846
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| || || || |||||||| ||| ||||| | || ||
Sbjct 1445845 ATCCAGAAGGAGTCTACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 1445799
Score = 87.8 bits (96), Expect = 2e-12
Identities = 155/223 (70%), Gaps = 6/223 (3%)
Strand=Plus/Plus
Query 138507 GACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAA 138566
|| ||| |||||||| || | |||| | || ||||| |||||| || || ||
Sbjct 1115197 GATCTGGAATTCACCAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGGTTCGAA 1115256
Query 138567 CGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAG 138626
||||||| | |||| |||||| | || | || |||||||| |||||||||||
Sbjct 1115257 ACATTCGTTATAACCCATAATCTGGGAAGTAGAAGCAGTCGGCATAGGTGCCACCAAAAG 1115316
Query 138627 AGAATTCCGTAAACCGTGAAGCTTG--ATTCGTT-CCTTGAGCGACGACCAGTCCCACAA 138683
||| || | | ||| | |||| | || | |||| || | |||||||||||
Sbjct 1115317 AGAGTTTCTAAGACC---AGTCTTGGCAATCTTAGCCTTCAGAGTATCCCAGTCCCACAG 1115373
Query 138684 ATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCC 138726
||| |||| ||||||||||||||||| || |||| || |||
Sbjct 1115374 ATCCGTAGGCTTTTTGTTCCACATATCATATTGTAGAATACCC 1115416
>seq1
Length=1824870
Score = 140 bits (154), Expect = 3e-28
Identities = 175/240 (73%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || |||| || | || ||||| ||||| || | || || || | ||
Sbjct 737926 ATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACTATCACCTTGGAGGTGGAGTCTTCC 737985
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||||||||| || || || ||||| || || ||||||
Sbjct 737986 GATACCATTGACAATGTCAAGCAAAAGATCCAGGATAAGGAGGGAATTCCACCTGATCAA 738045
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||||||||| || || ||| |||||||| |||| |||| || || |||
Sbjct 738046 CAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGTAGAACTTTGTCTGACTACAAC 738105
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCCA 24943
||||| |||||||| || || |||||||| ||| ||||| | ||||| | |||||||
Sbjct 738106 ATTCAGAAGGAATCTACTCTTCACTTGGTCTTGAGATTGAGAGGAGGTATCATTGAGCCA 738165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897442535840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |