Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 2e-13 seq23 86.0 8e-12 >seq3 Length=519016 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/147 (75%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 193446 CCTGAAATAGGGGATAAATTTTGTTC-AGGAATGGCCCAAAAAGGAACTTGTGGTATGAT 193504 ||| |||| || || || ||| || ||| |||| | | || || || |||||||| Sbjct 54357 CCTCAAATTGGTGACAAGTTTGCCTCCAGGCATGGTC-AGAAGGGTACGATTGGTATGAC 54415 Query 193505 TTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTATTAA 193564 || ||| || ||||||||||||||||| |||||| || ||||||||||| ||||| Sbjct 54416 GTACAGACATGAGGATATGCCATTTACAGCAGAAGGTATTGTTCCAGATATTATCATTAA 54475 Query 193565 TCCAAATTGTATTCCATCCAGAATGAC 193591 || ||||||| |||||| | ||||| Sbjct 54476 CCCTCATTGTATCCCATCCCGTATGAC 54502 >seq23 Length=1344041 Score = 86.0 bits (94), Expect = 8e-12 Identities = 110/149 (74%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 168592 TTTGGAACGATAATGGTTCTCGTGAATTTTTAGATT-TATGTGGTTTTACCGAAAGAAAA 168650 ||||| | | |||||| || | |||| |||||||| ||| || | || || ||| Sbjct 1151435 TTTGGGAAGGTAATGGATCAAGAGAATATTTAGATTCTATAGGGCTC-ACAGATAGACGG 1151493 Query 168651 GAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATT 168710 |||| |||||| || || || || ||||| |||||||||||| || || |||||| Sbjct 1151494 GAAGATGATTTGGGACCGATATACGGATTCCAATGGAGACATTTTGGTGCCGAATATAAG 1151553 Query 168711 GACTGTGATACAGATTACACCGGACAAGG 168739 || |||||||| |||||||| || |||| Sbjct 1151554 GATTGTGATACGGATTACACAGGCAAAGG 1151582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635177377687840