Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq3 91.5 2e-13
seq23 86.0 8e-12
>seq3
Length=519016
Score = 91.5 bits (100), Expect = 2e-13
Identities = 110/147 (75%), Gaps = 2/147 (1%)
Strand=Plus/Plus
Query 193446 CCTGAAATAGGGGATAAATTTTGTTC-AGGAATGGCCCAAAAAGGAACTTGTGGTATGAT 193504
||| |||| || || || ||| || ||| |||| | | || || || ||||||||
Sbjct 54357 CCTCAAATTGGTGACAAGTTTGCCTCCAGGCATGGTC-AGAAGGGTACGATTGGTATGAC 54415
Query 193505 TTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTATTAA 193564
|| ||| || ||||||||||||||||| |||||| || ||||||||||| |||||
Sbjct 54416 GTACAGACATGAGGATATGCCATTTACAGCAGAAGGTATTGTTCCAGATATTATCATTAA 54475
Query 193565 TCCAAATTGTATTCCATCCAGAATGAC 193591
|| ||||||| |||||| | |||||
Sbjct 54476 CCCTCATTGTATCCCATCCCGTATGAC 54502
>seq23
Length=1344041
Score = 86.0 bits (94), Expect = 8e-12
Identities = 110/149 (74%), Gaps = 2/149 (1%)
Strand=Plus/Plus
Query 168592 TTTGGAACGATAATGGTTCTCGTGAATTTTTAGATT-TATGTGGTTTTACCGAAAGAAAA 168650
||||| | | |||||| || | |||| |||||||| ||| || | || || |||
Sbjct 1151435 TTTGGGAAGGTAATGGATCAAGAGAATATTTAGATTCTATAGGGCTC-ACAGATAGACGG 1151493
Query 168651 GAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATT 168710
|||| |||||| || || || || ||||| |||||||||||| || || ||||||
Sbjct 1151494 GAAGATGATTTGGGACCGATATACGGATTCCAATGGAGACATTTTGGTGCCGAATATAAG 1151553
Query 168711 GACTGTGATACAGATTACACCGGACAAGG 168739
|| |||||||| |||||||| || ||||
Sbjct 1151554 GATTGTGATACGGATTACACAGGCAAAGG 1151582
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635177377687840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |