Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq12 159 8e-34 >seq12 Length=1682134 Score = 159 bits (176), Expect = 8e-34 Identities = 401/602 (67%), Gaps = 17/602 (3%) Strand=Plus/Minus Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361 |||| ||||||||||| ||| | |||||| ||||| | | | | ||||| || | Sbjct 1116683 ACTACTTTGGTTTCAAGACTTTGGAACGTTCTTATCTGTTGAGAATTAATGGTAAGGTTG 1116624 Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421 |||| | || |||||| | || | | || || | ||||||||||| |||||||| Sbjct 1116623 CTGAAAGACCACAACACCTTCTTATGAGAGTGGCCGTCGGTATTCATGGTGATGATATTC 1116564 Query 110422 --AAGCTGTTATTGAATGTTATGATGTATTAAGTAAAA-AGAAAGCT-ATTCATGCTACT 110477 ||| |||| |||| ||||| | | || ||| ||| | | | ||||| | Sbjct 1116563 CTAAGGTGTTG--GAATCATATGACTTGAT--GTCAAAGAGATACTTCACACATGCATCA 1116508 Query 110478 CCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGA 110537 || || | || || || || ||| | || || | || ||||| | | | | Sbjct 1116507 CCAACGTTGTTCAATGCTGGTACTCCACGCCCTCAGATGTCATCATGCTTCTTAGTTGCA 1116448 Query 110538 ATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCT 110597 || || ||||| |||||||||||||| || ||| || | ||| | |||| | |||||| Sbjct 1116447 ATGAAAGATGACTCTATTGAAGGTATCTACGATACTTTGAAACAGTGTGCTTTGATTTCT 1116388 Query 110598 AAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATC 110657 || | |||| || |||||| ||||| |||| | ||||| || | || | |||| Sbjct 1116387 AAGACTGCTGGTGGTATTGGTCTTCACATTCACAACATTCGTTCCACTGGTTCGTATATT 1116328 Query 110658 GCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACT 110717 || | || ||| | || | || | |||| ||| | | || |||||| ||| Sbjct 1116327 GCCGGTACTAATGGTACATCCAACGGTATAATTCCGATGGTTCGTGTGTTCAACAGTACT 1116268 Query 110718 GCAAAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAA 110774 || | ||||||| ||||||||||| |||||| || | ||||||| || | || Sbjct 1116267 GCTAGATATGTGGATCAAGGTGGTAACAAGAGACCAGGTGCCATTGCTATTTACTTGGAG 1116208 Query 110775 CCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAA 110834 ||||||||| | ||||| || || || | || | | || ||||| || | |||| Sbjct 1116207 CCTTGGCATGCTGATATCTTCGACTTTATCGATATCAGAAAGAATCATGG---TAAAGAG 1116151 Query 110835 CAAA---GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGT 110891 | | | ||||||||||| ||| || | |||||| |||||||||| ||||| ||| Sbjct 1116150 GAGATTCGTGCACGTGATTTGTTTCCAGCTCTTTGGATTCCAGATTTATTTATGAAGCGT 1116091 Query 110892 GT 110893 || Sbjct 1116090 GT 1116089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812374230908