Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq12 131 4e-25 seq1 116 9e-21 >seq12 Length=1682134 Score = 131 bits (144), Expect = 4e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || ||||| ||||| ||||| ||| ||||| | || || |||||| Sbjct 1446001 ACCGGTAAGACTATCACCTTGGAGGTGGAGTCTTCCGACACCATTGACAATGTCAAGCAA 1445942 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || || ||||| || || || ||| | ||||| || || ||| Sbjct 1445941 AAGATCCAAGACAAGGAGGGAATCCCACCAGATCAGCAGAGATTGATCTTTGCTGGTAAG 1445882 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 |||||||| ||||| || |||||| | || |||||| ||||||| ||||||||||||||| Sbjct 1445881 CAGTTGGAGGATGGCAGAACTTTGTCGGACTACAACATCCAGAAGGAGTCTACTCTTCAC 1445822 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 1445821 TTGGTCTTGAGA 1445810 Score = 86.0 bits (94), Expect = 1e-11 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 204757 TCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCC 204816 |||||| || | ||||||||||||||| ||||||| || ||||| | |||||| || || Sbjct 1445810 TCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGACAAAGTTCTGCC 1445869 Query 204817 ATCTTCCAGCTGCTTTCCGGCGAAGAT 204843 ||| |||| |||||| || || ||||| Sbjct 1445870 ATCCTCCAACTGCTTACCAGCAAAGAT 1445896 >seq1 Length=1824870 Score = 116 bits (128), Expect = 9e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || ||||| ||||| ||||| ||| || || | || || |||||| Sbjct 737950 ACGGGTAAGACTATCACCTTGGAGGTGGAGTCTTCCGATACCATTGACAATGTCAAGCAA 738009 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || || || |||||| || || || ||| | ||||| || || ||| Sbjct 738010 AAGATCCAGGATAAGGAGGGAATTCCACCTGATCAACAGAGATTGATCTTTGCTGGTAAG 738069 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 |||||||| ||||| || |||||| | || |||||| | ||||| || |||||||||||| Sbjct 738070 CAGTTGGAGGATGGTAGAACTTTGTCTGACTACAACATTCAGAAGGAATCTACTCTTCAC 738129 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 738130 TTGGTCTTGAGA 738141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820376021788