Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq12 131 4e-25
seq1 116 9e-21
>seq12
Length=1682134
Score = 131 bits (144), Expect = 4e-25
Identities = 144/192 (75%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || ||||| ||||| ||||| ||| ||||| | || || ||||||
Sbjct 1446001 ACCGGTAAGACTATCACCTTGGAGGTGGAGTCTTCCGACACCATTGACAATGTCAAGCAA 1445942
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || || ||||| || || || ||| | ||||| || || |||
Sbjct 1445941 AAGATCCAAGACAAGGAGGGAATCCCACCAGATCAGCAGAGATTGATCTTTGCTGGTAAG 1445882
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|||||||| ||||| || |||||| | || |||||| ||||||| |||||||||||||||
Sbjct 1445881 CAGTTGGAGGATGGCAGAACTTTGTCGGACTACAACATCCAGAAGGAGTCTACTCTTCAC 1445822
Query 206374 CTTGTTTTGAGA 206385
| || ||||||
Sbjct 1445821 TTGGTCTTGAGA 1445810
Score = 86.0 bits (94), Expect = 1e-11
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 204757 TCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCC 204816
|||||| || | ||||||||||||||| ||||||| || ||||| | |||||| || ||
Sbjct 1445810 TCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGACAAAGTTCTGCC 1445869
Query 204817 ATCTTCCAGCTGCTTTCCGGCGAAGAT 204843
||| |||| |||||| || || |||||
Sbjct 1445870 ATCCTCCAACTGCTTACCAGCAAAGAT 1445896
>seq1
Length=1824870
Score = 116 bits (128), Expect = 9e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || ||||| ||||| ||||| ||| || || | || || ||||||
Sbjct 737950 ACGGGTAAGACTATCACCTTGGAGGTGGAGTCTTCCGATACCATTGACAATGTCAAGCAA 738009
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| || || || || |||||| || || || ||| | ||||| || || |||
Sbjct 738010 AAGATCCAGGATAAGGAGGGAATTCCACCTGATCAACAGAGATTGATCTTTGCTGGTAAG 738069
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|||||||| ||||| || |||||| | || |||||| | ||||| || ||||||||||||
Sbjct 738070 CAGTTGGAGGATGGTAGAACTTTGTCTGACTACAACATTCAGAAGGAATCTACTCTTCAC 738129
Query 206374 CTTGTTTTGAGA 206385
| || ||||||
Sbjct 738130 TTGGTCTTGAGA 738141
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820376021788
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |