Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq4 98.7 1e-14 >seq4 Length=428324 Score = 98.7 bits (108), Expect = 1e-14 Identities = 201/295 (68%), Gaps = 3/295 (1%) Strand=Plus/Minus Query 1817484 GTCCATGACCAGGCCGATGATGGGCTTGTTGGCCTGCGGCGACACGGTCTTGAGGGCCAC 1817543 |||| ||| | ||| |||| |||||||||| ||||||||||||| ||| | ||| Sbjct 57122 GTCCTGGACAATGCCCATGACCGGCTTGTTGGACTGCGGCGACACGATCTGCCTTGGCAC 57063 Query 1817544 -GTTCATGGTGTGCGTCACCTCGGCGCGCGCGTCTCA-GACTGGGGCACATGGAGGTTCA 1817601 | || | | | | || ||| || || || | ||||| || || || | ||||| Sbjct 57062 CGCACA-GATCTCCTCCAACTCTGCCTTCGTCTCGTACGACTGCGGGACGTGCATGTTCA 57004 Query 1817602 TCTCGTCGCCGTCAAAGTCGGCATTGTAGGTGCCCGTGACGGCCAGGTTGAACCGCATGG 1817661 ||||||| ||||| |||||||| ||||||| ||| || | || ||||| || | | Sbjct 57003 TCTCGTCACCGTCGAAGTCGGCGTTGTAGGGCGTCGTCACCGACAAGTTGATCCTGAACG 56944 Query 1817662 TACGGCCGGGCATGGGCACCACCTTGTGCATGAGCATGGAGCCCATGTGGAGTGAGGGCT 1817721 | | ||||| | ||||||||| | ||| || | |||| || || |||| Sbjct 56943 TCGAGAACGGCATCACCCGCACCTTGTGGCACATCATCGACATCTTGTGAAGCGACGGCT 56884 Query 1817722 GCCGGTTCATCACCACGGCGTCGCCGGCGCGCAGGTGACGCTCGACTGTCCACCC 1817776 ||| ||| | | ||| | ||||||| | || ||| ||||| ||| ||||||| Sbjct 56883 GCCTGTTGAAAAGCACCGGGTCGCCGTCCATCAAGTGCCGCTCCACTTTCCACCC 56829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177808499348536