Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq12 145 7e-30 seq1 134 1e-26 >seq12 Length=1682134 Score = 145 bits (160), Expect = 7e-30 Identities = 179/245 (73%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 35496 TCATCTCTTTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAA 35555 || ||| || || ||||| | || ||||| ||||| || | ||| |||||| || | Sbjct 1445785 TCTTCTTCTTCTTACCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGA 1445844 Query 35556 TGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCT 35615 ||||||| || | ||| |||| | || |||| ||||||||| ||||| ||||| | || Sbjct 1445845 TGTTGTAGTCCGACAAAGTTCTGCCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCT 1445904 Query 35616 GCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGT 35675 |||| || | || | | ||||||||| |||||||||||| | | | | | |||| Sbjct 1445905 GCTGATCTGGTGGGATTCCCTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGT 1445964 Query 35676 CGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735 || || |||||||||| ||||| || ||||| |||||||| || || || || |||| Sbjct 1445965 CGGAAGACTCCACCTCCAAGGTGATAGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCA 1446024 Query 35736 TTCTG 35740 || || Sbjct 1446025 TTTTG 1446029 >seq1 Length=1824870 Score = 134 bits (148), Expect = 1e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 35519 AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGC 35578 || ||||| ||||| || | ||| ||||| ||||||||||| || | ||| |||| Sbjct 738143 AATCTCAAGACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAGTCAGACAAAGTTCTA 738084 Query 35579 TCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCC 35638 | || |||| ||||||||| ||||| ||||| | ||| || || | |||| | |||| Sbjct 738083 CCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGGAATTCCCTCC 738024 Query 35639 TTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTG 35698 || ||| |||||||||||| | | | | | || ||| || |||||||||| ||| Sbjct 738023 TTATCCTGGATCTTTTGCTTGACATTGTCAATGGTATCGGAAGACTCCACCTCCAAGGTG 737964 Query 35699 ATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 || || ||||||||||| || || || || || |||||| Sbjct 737963 ATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATT 737925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793442222240