Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq12 145 7e-30
seq1 134 1e-26
>seq12
Length=1682134
Score = 145 bits (160), Expect = 7e-30
Identities = 179/245 (73%), Gaps = 0/245 (0%)
Strand=Plus/Plus
Query 35496 TCATCTCTTTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAA 35555
|| ||| || || ||||| | || ||||| ||||| || | ||| |||||| || |
Sbjct 1445785 TCTTCTTCTTCTTACCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGA 1445844
Query 35556 TGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCT 35615
||||||| || | ||| |||| | || |||| ||||||||| ||||| ||||| | ||
Sbjct 1445845 TGTTGTAGTCCGACAAAGTTCTGCCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCT 1445904
Query 35616 GCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGT 35675
|||| || | || | | ||||||||| |||||||||||| | | | | | ||||
Sbjct 1445905 GCTGATCTGGTGGGATTCCCTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGT 1445964
Query 35676 CGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735
|| || |||||||||| ||||| || ||||| |||||||| || || || || ||||
Sbjct 1445965 CGGAAGACTCCACCTCCAAGGTGATAGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCA 1446024
Query 35736 TTCTG 35740
|| ||
Sbjct 1446025 TTTTG 1446029
>seq1
Length=1824870
Score = 134 bits (148), Expect = 1e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 35519 AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGC 35578
|| ||||| ||||| || | ||| ||||| ||||||||||| || | ||| ||||
Sbjct 738143 AATCTCAAGACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAGTCAGACAAAGTTCTA 738084
Query 35579 TCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCC 35638
| || |||| ||||||||| ||||| ||||| | ||| || || | |||| | ||||
Sbjct 738083 CCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGGAATTCCCTCC 738024
Query 35639 TTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTG 35698
|| ||| |||||||||||| | | | | | || ||| || |||||||||| |||
Sbjct 738023 TTATCCTGGATCTTTTGCTTGACATTGTCAATGGTATCGGAAGACTCCACCTCCAAGGTG 737964
Query 35699 ATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737
|| || ||||||||||| || || || || || ||||||
Sbjct 737963 ATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATT 737925
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793442222240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |