Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq12 158 1e-33
seq1 140 3e-28
>seq12
Length=1682134
Score = 158 bits (174), Expect = 1e-33
Identities = 178/236 (75%), Gaps = 2/236 (1%)
Strand=Plus/Plus
Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542
||| || ||||| | || ||| || | ||| || || || ||||| || |||||||||||
Sbjct 1445795 CTTACCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTC 1445854
Query 134543 -GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGG 134601
| ||| | | || | || || | ||| || || ||||| ||||| | ||||||||| |
Sbjct 1445855 CGACAAAGTTCTGCCA-TCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCTG 1445913
Query 134602 GCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATT 134661
| || || || || || ||||| || ||||| ||||| ||| | |||||||| || |
Sbjct 1445914 GTGGGATTCCCTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGACT 1445973
Query 134662 CCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|||| || | || || || |||||||| ||||| |||||||||||||||||||||
Sbjct 1445974 CCACCTCCAAGGTGATAGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCATTTTG 1446029
>seq1
Length=1824870
Score = 140 bits (154), Expect = 3e-28
Identities = 171/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|||||||| | || ||| || | ||| || || |||||||| |||||||||||||| | |
Sbjct 738152 CCTCCTCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAGTCAGAC 738093
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | ||| || || ||||| ||||| | ||| ||||| || ||
Sbjct 738092 AAAGTTCTACCA-TCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGG 738034
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| || || || || || || ||||| ||||| ||| | || ||||| || |||||
Sbjct 738033 AATTCCCTCCTTATCCTGGATCTTTTGCTTGACATTGTCAATGGTATCGGAAGACTCCAC 737974
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
|| | || || || ||||| || || || ||||||||||||||||||||
Sbjct 737973 CTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTT 737923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398223110560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |