Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq12 324 2e-83
seq23 226 4e-54
>seq12
Length=1682134
Score = 324 bits (358), Expect = 2e-83
Identities = 1344/2096 (64%), Gaps = 37/2096 (2%)
Strand=Plus/Plus
Query 68403 TGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACT 68462
|||||||| ||||||||||| ||||||| || |||| || || || |||||
Sbjct 1114882 TGTACGTAAGTAGTACATACCTGTTTTCAAGCCCTTCTTCCAGCCATAAAAGTGCATGGA 1114941
Query 68463 TGTTAGTTTGGAATAACTTGGAT-CGGCTATATGAATATTCATCGATTGACTTTGATCGA 68521
|| | ||| | |||| | || | ||| || ||||| |||||| || ||
Sbjct 1114942 AGTCAATTTACCCATAGTTGGTGACTGCAA-ATGGATGTTCATAGATTGAGACTGGCAGA 1115000
Query 68522 TGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAG 68581
|| | || || ||||| || ||||| | || | | ||| |||| ||| ||||||| |
Sbjct 1115001 TGTATGCGCCCCTATCAGCAGCCATATCGATGACAGACTTCTGAGAAATCTCCCAAACTG 1115060
Query 68582 TCTTAAAAATCTGTTTGATATCATCTGGAAGGCTCGTA---TTTTGAATGGATCCACCAT 68638
|| | | | || ||||| | ||| |||| | | | || ||||| || || |
Sbjct 1115061 TCCTGTACAACTTCTTGATCTTATCGGGAACGTTTGGCAAGTTCTGAATAGAACCGTTGT 1115120
Query 68639 CGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAA 68698
|| || || | ||||| || |||| ||||| | | | || | | | |||| |
Sbjct 1115121 CGTGAATGATGAAGTTCTTCATTGCATCGTTCCATATTCCCATGTCAATAAGATCTCTCA 1115180
Query 68699 GGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTAC 68758
| | |||||||| || || ||||| |||| | ||||| | || || |||
Sbjct 1115181 ACATGTAAGGATTAACGATCTGGAATTCACCAGCAAGAACTCTTCTCTGATAGATGTTAG 1115240
Query 68759 TGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCA 68818
||| ||||||| | | |||| |||| |||| ||| || | ||| || ||||| ||||
Sbjct 1115241 AGGTGAATGGTTCGAAACATTCGTTATAACCCATAATCTGGGAAGTAGAAGCAGTCGGCA 1115300
Query 68819 TAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATT-TTATCTTTTAGATGT 68877
||||||||||||| | | |||||||||||| || || | | ||| | || |||
Sbjct 1115301 TAGGTGCCACCAAAAGAGAGTTTCTAAGACCA-GTCTTGGCAATCTTAGCCTTCAGAGTA 1115359
Query 68878 TTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTA 68937
| ||| ||||| ||||| | || ||||| | ||| ||||||||||| || ||
Sbjct 1115360 TCCCAGTCCCACAGATCCGTAGGCTTTTTGTTCCACATATCATATTGTAGAATACCCTTT 1115419
Query 68938 CTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTT 68997
|| || || | |||||| | ||||| || || | |||| || | |
Sbjct 1115420 GAAGCTGGAGAGCCTTCATATGTCTGATAAGTACCCTCTTCCACAGCAAGCTGGTTGGAT 1115479
Query 68998 GCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCT 69057
|||| |||||| ||| ||| | || || || |||| | || || || |||| |||
Sbjct 1115480 TCCTCCAATGCAGCGTGATACAAGGTCTCAAATATCTGAATGTTAAGCTCCCGTGCATCT 1115539
Query 69058 AGACTATCGAATGGATAATGTAA--AAGAATAAATGCATCTGCCAATCCCTGAACCCCAA 69115
||| || || || || | ||| | ||| || | ||| || | ||||| | ||||
Sbjct 1115540 GGACAGTCAAAAGG-TAGTCTAAGCATGAAGAAG-GTATCAGCAAGACCCTGGATACCAA 1115597
Query 69116 TACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAA 69175
| | |||||||| | |||| | || || | || || |||| ||||| |||||
Sbjct 1115598 GAGCAATAGGTCTGTTTCTCATGTTGGAGTTACGGGCCTCAGGAACTGGATAGTAATTTC 1115657
Query 69176 TATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTT---AGTTTGA 69232
| || |||| || | || ||| || |||||| | || | | | ||
Sbjct 1115658 TGTCAATAACACGGTTTAAGTTACGGGTAACAACTTTAGTAA--TCTTGTGCAACTTCTC 1115715
Query 69233 GAA----AATCA--AATCGTCCATCTATAACA-AACATATTCAGTGCTACAGATGCTAGA 69285
||| || || ||| ||| | | || |||| | ||| ||| ||| | |
Sbjct 1115716 GAAGTTGAACCAGCAATGATCCTCATCTGACTCAACAAAGGCAGGCAAACAAATGTTGGC 1115775
Query 69286 ----TTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATT 69341
||||| || | ||||||| | | | || | | | ||| || | ||
Sbjct 1115776 CAAGTTACACACACCAACCTCATCTGGAGAGGAGTACTCGACAACCTCACAGCACAAGTT 1115835
Query 69342 ACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTA 69401
| ||||||| || |||| || | ||||||||||||| | ||||| || ||||||||
Sbjct 1115836 CGAAGATTTGATGGTACCCAAGTTCTTCTGATTACTCTTTCTATTACAAGCATCCTTGTA 1115895
Query 69402 AAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCT 69461
| || || || ||||||||||| |||||| || | ||| | ||| | |
Sbjct 1115896 GATCATGAAAGGTGTACCAGTTTCTGTCTGAGCCTCCAAAATCTGGTACCATAACTTCTG 1115955
Query 69462 AGCATTTATTACGGTCTTGTAACGCTTC--TCTTTTTCATATTGTGTATATAGCCGTTCG 69519
||| || | | | |||| | | | || ||||| || || | || || | |||
Sbjct 1115956 AGCCTTCACT--GTTCTTCTTCCACGTCCTTCTTTCTCGTAACGAGTGTACAATTTCTCG 1116013
Query 69520 AATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCAC 69579
|| || || || ||||||| | || || ||| ||| | | ||||| ||||
Sbjct 1116014 AACTCGTCACCGTAAACATCTGAGAGACCTGGTGCCTCAGAAGGAGAGAACAATGTCCAC 1116073
Query 69580 ACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGA 69639
|| | || || || |||||||||| ||| ||||||||||||||| ||| | |
Sbjct 1116074 TTGTCGTTGCTCTCCACACGCTTCATAAATAAATCTGGAATCCAAAGAGCTGGAAACAAA 1116133
Query 69640 TCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATA 69699
|| | | | | | || || || || ||| ||| | | ||||| ||| || | |||
Sbjct 1116134 TCACGTGCACGAATCTCCTCTTTACCATGATTCTTTCTGATATCGATAAAGTCGAAGATA 1116193
Query 69700 TCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGA 69759
|||| |||||| || || | || || || ||| | || |||| || || || || |||
Sbjct 1116194 TCAGCATGCCAAGGCTCCAAGTAAATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGA 1116253
Query 69760 TCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTA 69819
|| | ||||| ||||| | || | || | | ||||||||| ||||| || ||| ||
Sbjct 1116254 TCCACATATCTAGCAGTACTGTTGAACACACGAACCATCGGAATTATACCGTTGGATGTA 1116313
Query 69820 CCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATT 69879
||||| || || | |||||| || | | ||||| || ||| ||||| ||
Sbjct 1116314 CCATTAGTACCGGCAATATACGAACCAGTGGAACGAATGTTGTGAATGTGAAGACCAATA 1116373
Query 69880 CCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATG 69939
|| || || | ||||| || | |||||| ||||||| || || || ||||| || ||
Sbjct 1116374 CCACCAGCAGTCTTAGAAATCAAAGCACACTGTTTCAAAGTATCGTAGATACCTTCAATA 1116433
Query 69940 CTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCA 69999
|||||| |||| || | || || ||||| ||| | || ||| || |||
Sbjct 1116434 GAGTCATCTTTCATTGCAACTAAGAAGCATGATGACATCTGAGGGCGTGGAGTACCAGCA 1116493
Query 70000 TTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATG-TTTC 70058
|| || || || || ||||| || ||||| || | | || | || | |||| || |
Sbjct 1116494 TTGAACAACGTTGGTGATGCATGTGTGAAGTATCTCTTTGACATCAAGTCATATGATTCC 1116553
Query 70059 AATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCT 70117
|| | || | ||||| ||| |||||| || | || || | ||| | | || |
Sbjct 1116554 AACACCTTA-GGAATATCATCAC-CATGAATACCGACGGCCACTCTCATAAGAAGGTGTT 1116611
Query 70118 GAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAA 70177
| |||| ||| | ||| ||| ||| ||||||| || || ||||| ||| || |
Sbjct 1116612 GTGGTCTTTCAGCAACCTTACCATTAATTCTCAACAGATAAGAACGTTCCAAAGTCTTGA 1116671
Query 70178 ACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCT 70237
| ||||| |||||||| ||||| | |||||| |||| | || || | | |||||
Sbjct 1116672 AACCAAAGTAGTTGTAACTGAAGTCACGGTCGTAATTAATGGCTGAGTTCAACTCATCCT 1116731
Query 70238 TATATTTGGTAACTATATCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTT 70297
||| | |||| || | ||| | || || || ||||| || | |
Sbjct 1116732 TATGCTCCATAACAATCTTATAAACCTCATCAGAAATCATAGGAGACTTCTTCTGGGTCT 1116791
Query 70298 TAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCT 70357
| ||||| |||||| ||| ||| || || |||||| || | || || || | ||
Sbjct 1116792 TTGGATTGTAGTAGTTGTATAGATCCTCTATAACATCAGAGAAAGGCTTCTTAGTCTGCT 1116851
Query 70358 TGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAG 70417
|||| |||||||| || || | ||| || || | | |||||||||| ||||| ||| |
Sbjct 1116852 TGTGCAAATTTGAGATTGCAAGTCTAGCGGCCAAAGTAGCATAGTCTGGATGCATTGTGG 1116911
Query 70418 TACAAGTA-GCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCC 70472
| || ||| ||||| |||| |||| || | || || || || || ||||| ||
Sbjct 1116912 T-CATGTATGCTGCAGTTTCAGCAGTCAAATTGTCCAACTCAATGGTGGTAACACC 1116966
>seq23
Length=1344041
Score = 226 bits (250), Expect = 4e-54
Identities = 602/909 (66%), Gaps = 17/909 (2%)
Strand=Plus/Minus
Query 39303 CTTCTTGTGACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAG 39362
|| |||| | |||||| || || ||||| || ||| | ||||| || |||||||
Sbjct 978515 CTCCTTG-GCCATAACACCGGCCTTCTGGTAGTCGGAAACTCTCTTCTCAAAGAAATTAG 978457
Query 39363 TTTTGCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAttttt 39422
| || || |||| || |||||||||||||| || || ||||| || | || || |
Sbjct 978456 TCTTACCAGCCAAGGAGATATTTTCCATGAAGTCGAATGGATTTGTGACGTTGTAAACCT 978397
Query 39423 ttttAAATCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCA 39482
| | |||| ||| | || ||| || || ||| || || | ||| |||||
Sbjct 978396 TCTCGCATCCCAATGCGATAAGCAACCTGTCGGCACAGAACTCAACGTACTGAGCCATCA 978337
Query 39483 TTTCACAATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTT-AGAAACTCTTTTTCG 39541
| || | ||||| || | | |||||| ||||| || | ||||| | ||| ||
Sbjct 978336 TATCGAAGTTCATACCGAGTAAAGAAACTGGAAGAGCGTCTCTCCAGAAAGT-TTTCTCA 978278
Query 39542 ATGTCTACGGCCTCTGTTATTATCGA--TGTTACT-ACCTCATCACTCGGTGGATGCAAT 39598
|| | || ||||| || || || || || | |||| | || |||||||||
Sbjct 978277 ATATTAACAGCCTCGGTCATGATTCTCTTGATAATGACCTTA---CTTGGTGGATGCTTC 978221
Query 39599 AAATGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAAT 39658
|| || |||| | ||| || || || |||||| ||||||||||| | || |
Sbjct 978220 AAGTGAGAGAACAAAAGGCATGCAAAATCGGTATGTAGACCCTCATCTCTGCAGATAAGC 978161
Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718
|||||||| || || || || ||||| | ||| | ||| || | ||| || |||| |||
Sbjct 978160 TCGTTAGAGAACGTAAGGCCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGAGGCA 978101
Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGT-- 39776
|| |||||||| || || | ||||| | || ||||| ||||| | |||||| | |
Sbjct 978100 AACGATCCAGAGAAAAACACACCTTCAATGGCAGCAAAAGCAACCAATCTCTCAGCATAC 978041
Query 39777 -AACTTGTATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGC 39835
|| |||||| | |||||| || ||||| ||| |||| ||| | | ||
Sbjct 978040 AAAGCATCATCATTGTTTATCCATCTCAAAGCCCATAAAGCCTTCTCCTTAATAGGTGGA 977981
Query 39836 ATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCT 39895
||||| | || ||||| || | || | || | | || | | ||| || ||
Sbjct 977980 ATTGTATGGATGGCATTGAACAAGTAGTCGGACTCTTTCTTGTCAGTGATATAGGTCTCG 977921
Query 39896 ATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAA 39955
|| || || ||| | || || |||||||| |||| | ||||| || || || ||
Sbjct 977920 ATCAAAAGGGAATAAGTCTCAGAGTGGATGTTCTCAACCATAATCTGGAAACCATAGAAG 977861
Query 39956 CATCTTGCTTCAGTAATTTGTACCT-CTGAACAAAATCTTTCCGCCAAATTTTCATTCAC 40014
|||||| |||| | || |||| || | ||| | | | |||||||| |||| ||
Sbjct 977860 GCTCTTGCCTCAGGTAACTGCACCTGCTTCATAAAGT-TCTGTGCCAAATTCTCATCGAC 977802
Query 40015 TATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGG 40074
|| ||||| ||||||||| || ||||| ||| | || || ||| | |||| ||
Sbjct 977801 AATACCATCTGAAGCGGCAAAGAAGGCCAAGACACGAGAGATGAAGTATCTCTCATTGGC 977742
Query 40075 TGTCAATTT---ATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCA 40131
||| || ||||||||| | | ||| ||||| | ||| | || || || |||||
Sbjct 977741 ATTCATCTTGTCATTCCAGTCGGTCAAATCCTTTGAGAGATCGATCTCCTCGGCAGTCCA 977682
Query 40132 AAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAAT 40191
|| || ||||| ||||| |||||||| | |||||||||| || || || || || ||
Sbjct 977681 GAAAGAGGCCTCGGCCTTCTTGTACATTTGCCATATATCATCGTACTGAATAGGGAACAT 977622
Query 40192 AACAAATCT 40200
|| |||||
Sbjct 977621 CACGAATCT 977613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908559581920
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