Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq12 93.3 4e-14
>seq12
Length=1682134
Score = 93.3 bits (102), Expect = 4e-14
Identities = 172/252 (68%), Gaps = 3/252 (1%)
Strand=Plus/Plus
Query 130732 AAGATCTTTTACCAAATGATTATTAATGATTTGAAAATCACCAGCCAGGACGCGTCTAAC 130791
||||||| | | || | | ||||| ||| || || |||||||| || || | |||
Sbjct 1115170 AAGATCTCTCAACATGTAAGGATTAACGATCTGGAATTCACCAGCAAGAACTCTTCTCTG 1115229
Query 130792 GTAAATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGT 130851
|| ||||| ||||| ||||| || ||||||| | || | || || | ||||
Sbjct 1115230 ATAGATGTTAGAGGTGAATGGTTCGAAACATTCGTTATAACCCATAATCTGGGAAGTAGA 1115289
Query 130852 TGCGGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCG 130911
|| || ||||| |||||| || ||||| || | |||||| | | | || ||
Sbjct 1115290 AGCAGTCGGCATAGGTGCCACCAAAAGAGAGTTTCTAAGACCAGTCTTGGCAATCTTAGC 1115349
Query 130912 CTTCAATTCATCCCAATCCCATAGAGAGGTAGGTTTGACATTGTTCCACATATCAAATTG 130971
||||| |||||| ||||| ||| ||||| || ||||||||||||||| ||||
Sbjct 1115350 CTTCAGAGTATCCCAGTCCCACAGATCCGTAGGCTTT---TTGTTCCACATATCATATTG 1115406
Query 130972 TAGTATGCCTTT 130983
||| || || ||
Sbjct 1115407 TAGAATACCCTT 1115418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424934254991136
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |