Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq12 219 5e-52
seq22 134 2e-26
seq25 87.8 2e-12
>seq12
Length=1682134
Score = 219 bits (242), Expect = 5e-52
Identities = 1120/1756 (64%), Gaps = 61/1756 (3%)
Strand=Plus/Plus
Query 110369 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTG 110428
|||||||| || || || | || | ||||| | || | ||||| |||| | ||
Sbjct 1114892 TAGTACATACCTGTTTTCAAGCCCTTCTTCCAGCCATAAAAGTGCATGGAAGTCAATTTA 1114951
Query 110429 GACATCGTTGG--ACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAA-GCGC 110485
||| ||||| ||| ||| || ||||||| |||| ||| ||| | ||||
Sbjct 1114952 CCCATAGTTGGTGACTGCAAATG--GATGTTCATAGATTGAGACTGGCAGATGTATGCGC 1115009
Query 110486 CCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAG 110545
||| | || |||||||| |||||| |||| ||| ||||||||||| | ||
Sbjct 1115010 CCCTATCA-GCAGCCATATCGATGACAGACTTCTGAGAAATCTCCCAAACTGTCCTGTAC 1115068
Query 110546 AGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACC 110605
| |||||||| | ||| || | | || | ||||| || ||||| | | |
Sbjct 1115069 AACTTCTTGATCTTATCGGGAACGTTTGGCAAGTTCTGAATAGAACCGTTGTCGTGAATG 1115128
Query 110606 ATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGC 110665
|||| | |||||| | | | ||| | || || | | || || | | | ||
Sbjct 1115129 ATGAAGTTCTTCATTGCATCGTTCCATATTCCCATGTCAATAAGATCTCTCAACATGTAA 1115188
Query 110666 TTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTAT 110725
|| || || || ||||| || || ||||||| | |||||||| | ||| ||
Sbjct 1115189 GGATTAACGATCTGGAATTCACCAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAAT 1115248
Query 110726 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 110785
||||| || ||||| |||| ||||| || || | || || || || ||||| ||||||
Sbjct 1115249 GGTTCGAAACATTCGTTATAACCCATAATCTGGGAAGTAGAAGCAGTCGGCATAGGTGCC 1115308
Query 110786 ATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCG 110845
| ||||||| ||| | |||||| ||| || |||| ||| |||||||||
Sbjct 1115309 ACCAAAAGAGAGTTTCTAAGACCAGTCTTGGCAATCTTAGCCTTCAGAGTATCCCAGTCC 1115368
Query 110846 TAGTTGAGC--TTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGG 110903
| || | | || || |||| |||| ||| | || || | || | || || |
Sbjct 1115369 CACA-GATCCGTAGGCTTTTTGTTCC-ACATATCATATTGTAGAATACCCTTTGAAGCTG 1115426
Query 110904 GAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCA 110963
|||| || ||| | || | ||| | ||| | | |||| | | | ||||||
Sbjct 1115427 GAGAGCCTTCATATGTCTGATAAGTACCCTCTTCCACAGCAAGCTGGTTGGATTCCTCCA 1115486
Query 110964 GGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAA- 111022
| |||||||||| ||| ||||| || || || | |||| || ||||| |
Sbjct 1115487 ATGCAGCGTGATACAAGGTCTCAAATATCTGAATGTTAAGCTCCCGTGC---ATCTGGAC 1115543
Query 111023 --TCAAATGCGTAGCGGCA-CAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCA 111079
||||| | |||| | || | || ||| || ||||| || | ||| | | ||
Sbjct 1115544 AGTCAAAAG-GTAGTCTAAGCATGAAGAAGGTATCAGCAAGACCCTGGATACCAAGAGCA 1115602
Query 111080 ATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTG 111136
|||||||||| || ||| || || || || || |||| || ||||| ||||||||
Sbjct 1115603 ATAGGTCTGTTTCTCATGTTGGAGTTACGGGC---CTCAGGAACTGGATAGTAATTTCTG 1115659
Query 111137 TCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAA 111196
||||| || ||||||| || |||||||| || || || | || | || || |
Sbjct 1115660 TCAATAACACGGTTTAAGTTACGGGTAACAACTTTAGTAATCTTGTGCAACTTCTCGAAG 1115719
Query 111197 TCAAAAGTGCGAGTCTCTTCAT-TGACATA-CTTTGGAAGGG---CGATTGATG-CCAAA 111250
| || || | || |||| |||| | | || ||| | | || || ||||
Sbjct 1115720 TTGAACCAGCAATGATCCTCATCTGACTCAACAAAGGCAGGCAAACAAATGTTGGCCAAG 1115779
Query 111251 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAA 111310
|| || ||| | |||||| | | |||||| | || || || ||||| |||
Sbjct 1115780 TTACACACACCAACCTCATCTGGAGAGGAGTACTCGACAACCTCACAGCACAAGTTCGAA 1115839
Query 111311 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGC 111370
|| || || ||||| ||||| || |||||||| | || || ||||||||||||| |
Sbjct 1115840 GATTTGATGGTACCCAAGTTCTTCTGATTACTCTTTCTATTACAAGCATCCTTGTAGATC 1115899
Query 111371 ATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGC 111429
||| | || || || || || ||||| | | | ||| | ||| ||| || | | |
Sbjct 1115900 ATGAAAGGTGTACCAGTTTCTGTCTGAGCCTCCAAAATCTGGTACCATAACTTCTGAGCC 1115959
Query 111430 TGGTACAATGGCGTTGGCCC--GTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 111487
| || || || || |||| || |||||| ||||| | || |||
Sbjct 1115960 TT---CACTGTTCTTCTTCCACGTCCTTCTTTCTCGTAACGAGTGTACAATTTCTCGAAC 1116016
Query 111488 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAA-AGAGACCATTG 111546
|| ||||| | || |||||||||||||||| ||||| ||||| || ||
Sbjct 1116017 TCGTCACCGTAAACATCTGAGAGACCTGGTGCCT--------CAGAAGGAGAGAACAATG 1116068
Query 111547 ACCACCT-TC------CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAA 111599
|||| | || ||| || |||||||| || | ||||||||||| || | || ||
Sbjct 1116069 TCCACTTGTCGTTGCTCTCCACACGCTTCATAAATAAATCTGGAATCCAAAGAGCTGGAA 1116128
Query 111600 AGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCC 111658
| | ||| | | || ||| ||| || | ||| || || || | || | || ||
Sbjct 1116129 ACAAATCACGTGCA-CGAATCTCCTCTTTACCATGATTCTTTCTGATATCGATAAAGTCG 1116187
Query 111659 ATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCC 111714
| |||||| || ||||| ||||| | || | || || | || || | | ||
Sbjct 1116188 AAGATATCAGCATGCCAAGGCTCCAAGTAAATAGCAATGGCACCTGGTCTCTTG-TTACC 1116246
Query 111715 AGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATC 111774
| |||||| ||||| | || || ||| || || |||| ||| ||||| ||||| |
Sbjct 1116247 ACCTTGATCCACATATCTAGCAGTACTGTTGAACACACGAACCATCGGAATTATACCGTT 1116306
Query 111775 TGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCAT 111834
||| |||||| || || |||| || | ||| | | | || ||||| |
Sbjct 1116307 GGATGTACCATTAGTACCGGCAATATACGAACCAGTGGAACGAATGTTGTGAATGTGAAG 1116366
Query 111835 CCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACC 111894
|||||||| ||||| ||| || || ||||||| | | ||| | ||||||||
Sbjct 1116367 ACCAATACCACCAGCAGTCTTAGAAATCAAAGCACACTGTTTCAAAGTATCGTAGATACC 1116426
Query 111895 GTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGT 111954
| || ||||| || || | || | | |||||| |||||||| || | ||| ||
Sbjct 1116427 TTCAATAGAGTCATCTTTCATTGCAACTAAGAAGCATGATGACATCTGAGGGCGTGGAGT 1116486
Query 111955 ACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGT 112013
|||||||||||| | ||||||| ||| || |||| || || | |||||| ||| |
Sbjct 1116487 ACCAGCATTGAACAACGTTGGTGATGCATGTGTGAA-GTATCTCTTTGACATCAAGTCAT 1116545
Query 112014 ATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACA 112073
||| ||||| || | ||| || || || || || |||| || || | ||| | |
Sbjct 1116546 ATGATTCCAACACCTTAGGAATATCATCACCATGAATACCGACGGCCACTCTCATAAGAA 1116605
Query 112074 TGTACTGTGGGGTTTC 112089
|| ||||| ||||
Sbjct 1116606 GGTGTTGTGGTCTTTC 1116621
>seq22
Length=1510904
Score = 134 bits (148), Expect = 2e-26
Identities = 300/442 (68%), Gaps = 10/442 (2%)
Strand=Plus/Minus
Query 111251 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAA 111310
||||| || || |||| ||||| || |||||| | || ||| || | |||||
Sbjct 295573 TTGCACACGGCGATCTCGTCCTTGGATGAGTACTCGACAACTTCGCAGCAGAGATTGGAC 295514
Query 111311 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGC 111370
||| || || || | ||||| || || |||| ||||||| |||||| || ||
Sbjct 295513 GACTTGATGGTTCCAAGGTTCTTCTGATTCGACTTCGCATTGCACGAATCCTTATAAAGG 295454
Query 111371 ATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCGGCT 111430
| | | ||||| || ||||| ||||| || | ||||| || ||| || | | |||
Sbjct 295453 AGGAAAGGCGTTCCTGTCTCGGTCTGAGAATAAAGAATCCTCTCCCACACCTTGCGGGCC 295394
Query 111431 GGTACAA-TGGCGTTGGC-CCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACT 111488
| ||| || ||| | ||| || || ||||||| |||||| |||| ||||||||
Sbjct 295393 --TTCAACTGCCGTAGATACCGGCCTTCTTTTTCGTACTGTGTGTACAGGGATTCAAACT 295336
Query 111489 CCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGAC--CATTG 111546
| |||| ||| || || |||||||| ||| | |||||||||||| ||
Sbjct 295335 CGGGACCCCATTTGTCTGATAGTCCTGGTGC--TGTATCCTCAGAAAAGAGACTCCACAT 295278
Query 111547 ACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 111606
|| | | || || ||| ||||||| ||||| |||||||||| | ||||||||||
Sbjct 295277 CTCATCGTTCTTCACACGCCTCATGAACAGGTCCGGAATCCACAACGCATAAAAGAGATC 295218
Query 111607 TCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAAC-TCAAGGAACTCCATGATAT 111665
|| ||| || || | || ||||| || | | || ||||| |||| ||||
Sbjct 295217 CCTTGCCCGCATTTCCTCCTTGCCGTGGTTCT-TCTTGAGGTCGAGGAATTCCAGAATAT 295159
Query 111666 CCGCGTGCCATGGCTCAAGATA 111687
|||| ||||| |||||||||||
Sbjct 295158 CCGCATGCCAGGGCTCAAGATA 295137
>seq25
Length=757050
Score = 87.8 bits (96), Expect = 2e-12
Identities = 124/172 (72%), Gaps = 2/172 (1%)
Strand=Plus/Plus
Query 164604 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 164663
||||| | || |||||| |||| || | || ||||||||||||||||| |||||
Sbjct 282258 TATGGAAGAGTGGCACCAAGATCTGGATTAGCGGTGAAGCATGGTATTCATACCGGTGCT 282317
Query 164664 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 164723
||||| ||||| | ||||| | ||| ||||| || || || |||||||| | | ||
Sbjct 282318 GGTGTCATTGACTCAGACTACAGAGGAGAAGTTAAGGTTGTACTCTTCAACTTCAGCGAT 282377
Query 164724 AAAGACTTTGAG-GTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAG 164774
||||| ||| || | || || ||| | || |||||||| | ||||||
Sbjct 282378 AAAGA-TTTCAGCATTAACGCGGGTGATAGAATTGCACAACTCATTCTTGAG 282428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031780188800
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