Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq12 279 6e-70
seq22 111 2e-19
>seq12
Length=1682134
Score = 279 bits (308), Expect = 6e-70
Identities = 1132/1753 (65%), Gaps = 53/1753 (3%)
Strand=Plus/Minus
Query 104216 GAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGAT 104275
|||| ||||| || | | ||| | |||||| ||||||||||||| || || ||| |
Sbjct 1116621 GAAAGACCACAACACCTTCTTATGAGAGTGGCCGTCGGTATTCATGGTGATGATATTCCT 1116562
Query 104276 TCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAAC 104334
|| ||||| |||| ||| |||||| | || || |||| || ||| |||||||
Sbjct 1116561 AAGGTGTTGGAATCATATGACTTGATGTCAAAGAGATAC-TTCACACATGCATCACCAAC 1116503
Query 104335 CCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAA 104394
| |||||||||||||| ||| | || || ||||| |||||| | | || | ||
Sbjct 1116502 GTTGTTCAATGCTGGTACTCCACGCCCTCAGATGTCATCATGCTTCTTAGTTGCAATGAA 1116443
Query 104395 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 104454
|| ||||| || | |||||||| | ||| | | ||||||| || || |||
Sbjct 1116442 AGATGACTCTATTGAAGGTATCTACGATACTTTGAAACAGTGTGCTTTGATTTCTAAGAC 1116383
Query 104455 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 104514
||||| |||||||| | ||||| || | | | ||| | || |||| ||
Sbjct 1116382 TGCTGGTGGTATTGGTCTTCACATTCACAACATTCGTTCCACTGGTTCGTATATTGCCGG 1116323
Query 104515 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 104574
|| |||||| ||| | ||||| ||||| ||| |||| || || ||| || || |
Sbjct 1116322 TACTAATGGTACATCCAACGGTATAATTCCGATGGTTCGTGTGTTCAACAGTACTGCTAG 1116263
Query 104575 CTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCAT 104630
||||| |||||| ||| | | || || | || || | || | ||||| |
Sbjct 1116262 ATATGTGGATCAAGGTGGTAA-CAAGAGACCAGGTGCCATTGCTATTTACTTGGAGCCTT 1116204
Query 104631 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGC 104690
|||| || |||||| | || || | || | | || || ||| | |||||| |
Sbjct 1116203 GGCATGCTGATATCTTCGACTTTATCGATATCAGAAAGAATCATGGTAAAGAGGAGATTC 1116144
Query 104691 GGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 104749
| ||| || ||| | || | ||||| |||||||||||| | || |||||| | || |||
Sbjct 1116143 G-TGCACGTGATTTGTTTCCAGCTCTTTGGATTCCAGATTTATTTATGAAGCGTGTGGAG 1116085
Query 104750 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG 104809
| | ||| ||| | | || | ||| ||||||| |||||||| ||||
Sbjct 1116084 AGCAACGACAAGTGGACATTGTTCTCTCCTTCTGAGGCACCAGGTCTCTCAGATGTTTAC 1116025
Query 104810 GGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACG 104869
||||| ||||| || | ||||| |||||| ||||||| || | | ||
Sbjct 1116024 GGTGACGAGTTCGAGAAATTGTACACTCGTTACGAGAAAGAAGGACGTGGAAGAAGAACA 1115965
Query 104870 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928
||| ||| | || | | ||| | ||| | || |||| || || |||||||||||
Sbjct 1115964 GTGAAGGCT-CAGAAGTTATGGTACCAGATTTTGGAGGCTCAGACAGAAACTGGTACACC 1115906
Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988
| |||| | ||||| || || ||||| |||||||||||| ||||| |||||| ||
Sbjct 1115905 TTTCATGATCTACAAGGATGCTTGTAATAGAAAGAGTAATCAGAAGAACTTGGGTACCAT 1115846
Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTG--GAATTTACAGACAAAGATGAGACGGCT 105046
||| ||| || || ||| | | | ||| || | | ||||||| | |
Sbjct 1115845 CAAATCTTCGAA-CT-TGTGCTGTGAGGTTGTCGAGTACTCCTCTCCAGATGAGGTTGGT 1115788
Query 105047 GTGTGTAACCTCG-CATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACAT 105104
||||||||| | | || || | | | | || | ||| || |||| || | |||
Sbjct 1115787 GTGTGTAACTTGGCCAACATTTG-TTTGCCTGCCTTTGTTGAGTCAGATGAGGA--TCAT 1115731
Query 105105 T--TG-----ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAAC 105157
| || | | || || | ||| | |||| ||| ||| ||| ||| |||||
Sbjct 1115730 TGCTGGTTCAACTTCGAGAAGTTGCACAAGATTACTAAAGTTGTTACCCGTAACTTAAAC 1115671
Query 105158 AGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGA 105214
| |||||||| ||||||| || || || |||| || ||||| || || ||||||
Sbjct 1115670 CGTGTTATTGACAGAAATTACTATCCAGTTCCTGAG---GCCCGTAACTCCAACATGAGA 1115614
Query 105215 CACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGAT---GTATTCATTCTTTGTCGC 105271
|| | || |||| ||| ||| | |||||||| || ||| | ||||| ||| | |
Sbjct 1115613 AACAGACCTATTGCTCTTGGTATCCAGGGTCTTGCTGATACCTTCTTCATGCTTAGACTA 1115554
Query 105272 CACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTAT 105331
| | ||||| | || || ||| | || | |||||||||||| |||||
Sbjct 1115553 C---CTTTTGACTGTCCAGATGCACGGGAGCTTAACATTCAGATATTTGAGACCTTGTAT 1115497
Query 105332 CACGCCGCTCTTGAGGCGAGTTCA--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCT 105389
||||| || | ||| || | || || | || | || || ||| | ||| | || |
Sbjct 1115496 CACGCTGCATTGGAG--GAATCCAACCAGCTTGCTGTGGAAGAGGGTACTTATCAGACAT 1115439
Query 105390 TTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCA 105449
||| || |||||||||||| | || | || |||| |||||||||| | || | |
Sbjct 1115438 ATGAAGGCTCTCCAGCTTCAAAGGGTATTCTACAATATGATATGTGGAACAAAAAGCCTA 1115379
Query 105450 AGCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACA 105509
| || | |||||||| |||| |||| || ||| |||||| | |||
Sbjct 1115378 CGGATCTGTGGGACTGGGATACTCTGAAGGCTAAGATTGCCAAGACTGGTCTTAGAAACT 1115319
Query 105510 GTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAAT 105569
||| | |||| || ||||| || || || || | || || ||||| |||| ||||
Sbjct 1115318 CTCTTTTGGTGGCACCTATGCCGACTGCTTCTACTTCCCAGATTATGGGTTATAACGAAT 1115259
Query 105570 GCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGA 105629
| || ||||| | ||| | |||||||||| ||||||| || || || || || ||
Sbjct 1115258 GTTTCGAACCATTCACCTCTAACATCTATCAGAGAAGAGTTCTTGCTGGTGAATTCCAGA 1115199
Query 105630 TTGTCAA--CAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATAT 105687
| || || | ||| | || || || | || || || | ||| | | | ||
Sbjct 1115198 TCGTTAATCCTTACATGT--TGAGAGATCTTATTGACATGGGAATATGGAACGATGCAAT 1115141
Query 105688 GAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGA 105747
|||| | |||| | | | ||||| ||||| || | | |||| || |
Sbjct 1115140 GAAGAACTTCATCATTCACGACAACGGTTCTATTCAGAACTTGCCAAACGTTCCCGATAA 1115081
Query 105748 AATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGC 105807
|| |||||||||||| | ||||||||||| || |||| |||||| || |||||
Sbjct 1115080 GATCAAGAAGTTGTACAGGACAGTTTGGGAGATTTCTCAGAAGTCTGTCATCGATATGGC 1115021
Query 105808 CGCAGATCGTGGTCGC-TTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGT- 105865
|| ||| | || ||| | ||| || |||| |||||| || ||| |||
Sbjct 1115020 TGCTGATAG-GGGCGCATACATCTGCCAGTCTCAATCTATGAACATC--CATTTGCAGTC 1114964
Query 105866 -CCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAAC 105924
||||| ||| || | |||| |||||| | || | ||||||||||| | |||||
Sbjct 1114963 ACCAACTATGGGTAAATTGACTTCCATGCACTTTTATGGCTGGAAGAAGGGCTTGAAAAC 1114904
Query 105925 GGGGATGTATTAC 105937
|| ||||| |||
Sbjct 1114903 AGGTATGTACTAC 1114891
>seq22
Length=1510904
Score = 111 bits (122), Expect = 2e-19
Identities = 535/839 (64%), Gaps = 29/839 (3%)
Strand=Plus/Plus
Query 104618 TATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGT 104677
||||||||||| ||||| |||||||| |||| ||||| || | ||||| ||
Sbjct 295137 TATCTTGAGCCCTGGCATGCGGATATTCTGGAATTCCTCGACCTCAAGAAGAACCACGGC 295196
Query 104678 GACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATG 104737
| ||||| |||| | |||||||| | || | |||||||| || || ||||||
Sbjct 295197 AAGGAGGAAATGCGGGCAAGGGATCTCTTTTATGCGTTGTGGATTCCGGACCTGTTCATG 295256
Query 104738 AAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTC 104797
| | | || || | || | ||| |||||||| | || | ||||| || ||
Sbjct 295257 AGGCGTGTGAAGAACGATGAGATGTGGAGTCTCTTTTCTGAGGATACAGCACCAGGACTA 295316
Query 104798 TCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGG 104857
|| || |||| ||||||||| |||| |||||| ||||||| ||||||| | |
Sbjct 295317 TCAGACAAATGGGGTCCCGAGTTTGAATCCCTGTACACACAGTACGAAAAAGAAGG-CCG 295375
Query 104858 GCGACTGCGAC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGA 104916
| || || | | || || | | |||||| | ||||| | ||||| |||||
Sbjct 295376 GTATCTACGGCAGTTGAAGGCCCGCAAGGTGTGGGAGAGGATTCTTTATTCTCAGACCGA 295435
Query 104917 GACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAA 104976
||| || || || | | | ||||| || || | || || ||| ||||| |||||
Sbjct 295436 GACAGGAACGCCTTTCCTCCTTTATAAGGATTCGTGCAATGCGAAGTCGAATCAGAAGAA 295495
Query 104977 TTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGA 105036
| || |||||| ||||||||||| ||| | | || | || ||| ||
Sbjct 295496 CCTTGGAACCATCAAGTCGTCCAATCTCTGCTGCGAAGTTGTCGAGTACTCATCCAAGGA 295555
Query 105037 TGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGAC 105096
|||| || ||||| ||||| | || | | | || | || |||||| || ||
Sbjct 295556 CGAGATCGCCGTGTGCAACCTTGGCTCTGTTGGGTTGCCGATGTTTGTGGA-GGAG-GAA 295613
Query 105097 AAAGAC----ATTTGATTAT-------GAAAAACTCCACGAAGTTACGAAAACTGTCACC 105145
|| ||| | || | | || || |||||| | || |||| | ||
Sbjct 295614 AACGACGGTACTAGGAGTTTCAACCTGGAGAAGCTCCACCAGGTGGTGAAAGTTCTCGTG 295673
Query 105146 AAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAG-ACTGCTCGTAAATC 105204
|| ||||| ||| | ||||| ||| | ||||| ||||| | ||| | | ||
Sbjct 295674 AAGAACCTCAACCGGGTTATCGATGTGGGTGCATACCCGCTTGAGCAGTGC-AGAACGTC 295732
Query 105205 TAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATG---TATTCAT 105261
|||| ||| || ||||| |||| |||||||||| || | || |||| | ||||
Sbjct 295733 AAATACGAGGCATCGTCCGATTGCAGTCGGTGTTCAAGGATTAGCAGATGCTTTCTTCAG 295792
Query 105262 TCTTTGTCGCCACGCATTTG--ATTCCG-ACGAAGCGAAGGAAATCAATGCGCGCATATT 105318
|| | | | |||||| | |||| || |||| | ||| || || ||
Sbjct 295793 GCTGAGGTGTC---CATTTGGAAGTCCGTACTCCCGGAAGTTGAACAA---GCAAATCTT 295846
Query 105319 TGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCC 105378
| |||| || || || || || |||||| | | |||||||| || || || ||
Sbjct 295847 TCAGACGATCTACCATGCAGCCCTTGAGCAGTCTGTGGAGTTGGCTCAGAAAGACGGCCC 295906
Query 105379 ATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGG 105437
|||| || ||||| || || |||| || ||||| || ||||| | |||||||||||
Sbjct 295907 ATATTCGACGTTTGAAGGCTCGCCAGGCTCGCAAGGTGTTCTTCAGTATGATATGTGGG 295965
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260595858720
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