Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq12 279 6e-70 seq22 111 2e-19 >seq12 Length=1682134 Score = 279 bits (308), Expect = 6e-70 Identities = 1132/1753 (65%), Gaps = 53/1753 (3%) Strand=Plus/Minus Query 104216 GAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGAT 104275 |||| ||||| || | | ||| | |||||| ||||||||||||| || || ||| | Sbjct 1116621 GAAAGACCACAACACCTTCTTATGAGAGTGGCCGTCGGTATTCATGGTGATGATATTCCT 1116562 Query 104276 TCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAAC 104334 || ||||| |||| ||| |||||| | || || |||| || ||| ||||||| Sbjct 1116561 AAGGTGTTGGAATCATATGACTTGATGTCAAAGAGATAC-TTCACACATGCATCACCAAC 1116503 Query 104335 CCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAA 104394 | |||||||||||||| ||| | || || ||||| |||||| | | || | || Sbjct 1116502 GTTGTTCAATGCTGGTACTCCACGCCCTCAGATGTCATCATGCTTCTTAGTTGCAATGAA 1116443 Query 104395 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 104454 || ||||| || | |||||||| | ||| | | ||||||| || || ||| Sbjct 1116442 AGATGACTCTATTGAAGGTATCTACGATACTTTGAAACAGTGTGCTTTGATTTCTAAGAC 1116383 Query 104455 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 104514 ||||| |||||||| | ||||| || | | | ||| | || |||| || Sbjct 1116382 TGCTGGTGGTATTGGTCTTCACATTCACAACATTCGTTCCACTGGTTCGTATATTGCCGG 1116323 Query 104515 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 104574 || |||||| ||| | ||||| ||||| ||| |||| || || ||| || || | Sbjct 1116322 TACTAATGGTACATCCAACGGTATAATTCCGATGGTTCGTGTGTTCAACAGTACTGCTAG 1116263 Query 104575 CTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCAT 104630 ||||| |||||| ||| | | || || | || || | || | ||||| | Sbjct 1116262 ATATGTGGATCAAGGTGGTAA-CAAGAGACCAGGTGCCATTGCTATTTACTTGGAGCCTT 1116204 Query 104631 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGC 104690 |||| || |||||| | || || | || | | || || ||| | |||||| | Sbjct 1116203 GGCATGCTGATATCTTCGACTTTATCGATATCAGAAAGAATCATGGTAAAGAGGAGATTC 1116144 Query 104691 GGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 104749 | ||| || ||| | || | ||||| |||||||||||| | || |||||| | || ||| Sbjct 1116143 G-TGCACGTGATTTGTTTCCAGCTCTTTGGATTCCAGATTTATTTATGAAGCGTGTGGAG 1116085 Query 104750 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG 104809 | | ||| ||| | | || | ||| ||||||| |||||||| |||| Sbjct 1116084 AGCAACGACAAGTGGACATTGTTCTCTCCTTCTGAGGCACCAGGTCTCTCAGATGTTTAC 1116025 Query 104810 GGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACG 104869 ||||| ||||| || | ||||| |||||| ||||||| || | | || Sbjct 1116024 GGTGACGAGTTCGAGAAATTGTACACTCGTTACGAGAAAGAAGGACGTGGAAGAAGAACA 1115965 Query 104870 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928 ||| ||| | || | | ||| | ||| | || |||| || || ||||||||||| Sbjct 1115964 GTGAAGGCT-CAGAAGTTATGGTACCAGATTTTGGAGGCTCAGACAGAAACTGGTACACC 1115906 Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988 | |||| | ||||| || || ||||| |||||||||||| ||||| |||||| || Sbjct 1115905 TTTCATGATCTACAAGGATGCTTGTAATAGAAAGAGTAATCAGAAGAACTTGGGTACCAT 1115846 Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTG--GAATTTACAGACAAAGATGAGACGGCT 105046 ||| ||| || || ||| | | | ||| || | | ||||||| | | Sbjct 1115845 CAAATCTTCGAA-CT-TGTGCTGTGAGGTTGTCGAGTACTCCTCTCCAGATGAGGTTGGT 1115788 Query 105047 GTGTGTAACCTCG-CATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACAT 105104 ||||||||| | | || || | | | | || | ||| || |||| || | ||| Sbjct 1115787 GTGTGTAACTTGGCCAACATTTG-TTTGCCTGCCTTTGTTGAGTCAGATGAGGA--TCAT 1115731 Query 105105 T--TG-----ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAAC 105157 | || | | || || | ||| | |||| ||| ||| ||| ||| ||||| Sbjct 1115730 TGCTGGTTCAACTTCGAGAAGTTGCACAAGATTACTAAAGTTGTTACCCGTAACTTAAAC 1115671 Query 105158 AGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGA 105214 | |||||||| ||||||| || || || |||| || ||||| || || |||||| Sbjct 1115670 CGTGTTATTGACAGAAATTACTATCCAGTTCCTGAG---GCCCGTAACTCCAACATGAGA 1115614 Query 105215 CACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGAT---GTATTCATTCTTTGTCGC 105271 || | || |||| ||| ||| | |||||||| || ||| | ||||| ||| | | Sbjct 1115613 AACAGACCTATTGCTCTTGGTATCCAGGGTCTTGCTGATACCTTCTTCATGCTTAGACTA 1115554 Query 105272 CACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTAT 105331 | | ||||| | || || ||| | || | |||||||||||| ||||| Sbjct 1115553 C---CTTTTGACTGTCCAGATGCACGGGAGCTTAACATTCAGATATTTGAGACCTTGTAT 1115497 Query 105332 CACGCCGCTCTTGAGGCGAGTTCA--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCT 105389 ||||| || | ||| || | || || | || | || || ||| | ||| | || | Sbjct 1115496 CACGCTGCATTGGAG--GAATCCAACCAGCTTGCTGTGGAAGAGGGTACTTATCAGACAT 1115439 Query 105390 TTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCA 105449 ||| || |||||||||||| | || | || |||| |||||||||| | || | | Sbjct 1115438 ATGAAGGCTCTCCAGCTTCAAAGGGTATTCTACAATATGATATGTGGAACAAAAAGCCTA 1115379 Query 105450 AGCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACA 105509 | || | |||||||| |||| |||| || ||| |||||| | ||| Sbjct 1115378 CGGATCTGTGGGACTGGGATACTCTGAAGGCTAAGATTGCCAAGACTGGTCTTAGAAACT 1115319 Query 105510 GTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAAT 105569 ||| | |||| || ||||| || || || || | || || ||||| |||| |||| Sbjct 1115318 CTCTTTTGGTGGCACCTATGCCGACTGCTTCTACTTCCCAGATTATGGGTTATAACGAAT 1115259 Query 105570 GCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGA 105629 | || ||||| | ||| | |||||||||| ||||||| || || || || || || Sbjct 1115258 GTTTCGAACCATTCACCTCTAACATCTATCAGAGAAGAGTTCTTGCTGGTGAATTCCAGA 1115199 Query 105630 TTGTCAA--CAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATAT 105687 | || || | ||| | || || || | || || || | ||| | | | || Sbjct 1115198 TCGTTAATCCTTACATGT--TGAGAGATCTTATTGACATGGGAATATGGAACGATGCAAT 1115141 Query 105688 GAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGA 105747 |||| | |||| | | | ||||| ||||| || | | |||| || | Sbjct 1115140 GAAGAACTTCATCATTCACGACAACGGTTCTATTCAGAACTTGCCAAACGTTCCCGATAA 1115081 Query 105748 AATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGC 105807 || |||||||||||| | ||||||||||| || |||| |||||| || ||||| Sbjct 1115080 GATCAAGAAGTTGTACAGGACAGTTTGGGAGATTTCTCAGAAGTCTGTCATCGATATGGC 1115021 Query 105808 CGCAGATCGTGGTCGC-TTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGT- 105865 || ||| | || ||| | ||| || |||| |||||| || ||| ||| Sbjct 1115020 TGCTGATAG-GGGCGCATACATCTGCCAGTCTCAATCTATGAACATC--CATTTGCAGTC 1114964 Query 105866 -CCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAAC 105924 ||||| ||| || | |||| |||||| | || | ||||||||||| | ||||| Sbjct 1114963 ACCAACTATGGGTAAATTGACTTCCATGCACTTTTATGGCTGGAAGAAGGGCTTGAAAAC 1114904 Query 105925 GGGGATGTATTAC 105937 || ||||| ||| Sbjct 1114903 AGGTATGTACTAC 1114891 >seq22 Length=1510904 Score = 111 bits (122), Expect = 2e-19 Identities = 535/839 (64%), Gaps = 29/839 (3%) Strand=Plus/Plus Query 104618 TATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGT 104677 ||||||||||| ||||| |||||||| |||| ||||| || | ||||| || Sbjct 295137 TATCTTGAGCCCTGGCATGCGGATATTCTGGAATTCCTCGACCTCAAGAAGAACCACGGC 295196 Query 104678 GACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATG 104737 | ||||| |||| | |||||||| | || | |||||||| || || |||||| Sbjct 295197 AAGGAGGAAATGCGGGCAAGGGATCTCTTTTATGCGTTGTGGATTCCGGACCTGTTCATG 295256 Query 104738 AAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTC 104797 | | | || || | || | ||| |||||||| | || | ||||| || || Sbjct 295257 AGGCGTGTGAAGAACGATGAGATGTGGAGTCTCTTTTCTGAGGATACAGCACCAGGACTA 295316 Query 104798 TCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGG 104857 || || |||| ||||||||| |||| |||||| ||||||| ||||||| | | Sbjct 295317 TCAGACAAATGGGGTCCCGAGTTTGAATCCCTGTACACACAGTACGAAAAAGAAGG-CCG 295375 Query 104858 GCGACTGCGAC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGA 104916 | || || | | || || | | |||||| | ||||| | ||||| ||||| Sbjct 295376 GTATCTACGGCAGTTGAAGGCCCGCAAGGTGTGGGAGAGGATTCTTTATTCTCAGACCGA 295435 Query 104917 GACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAA 104976 ||| || || || | | | ||||| || || | || || ||| ||||| ||||| Sbjct 295436 GACAGGAACGCCTTTCCTCCTTTATAAGGATTCGTGCAATGCGAAGTCGAATCAGAAGAA 295495 Query 104977 TTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGA 105036 | || |||||| ||||||||||| ||| | | || | || ||| || Sbjct 295496 CCTTGGAACCATCAAGTCGTCCAATCTCTGCTGCGAAGTTGTCGAGTACTCATCCAAGGA 295555 Query 105037 TGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGAC 105096 |||| || ||||| ||||| | || | | | || | || |||||| || || Sbjct 295556 CGAGATCGCCGTGTGCAACCTTGGCTCTGTTGGGTTGCCGATGTTTGTGGA-GGAG-GAA 295613 Query 105097 AAAGAC----ATTTGATTAT-------GAAAAACTCCACGAAGTTACGAAAACTGTCACC 105145 || ||| | || | | || || |||||| | || |||| | || Sbjct 295614 AACGACGGTACTAGGAGTTTCAACCTGGAGAAGCTCCACCAGGTGGTGAAAGTTCTCGTG 295673 Query 105146 AAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAG-ACTGCTCGTAAATC 105204 || ||||| ||| | ||||| ||| | ||||| ||||| | ||| | | || Sbjct 295674 AAGAACCTCAACCGGGTTATCGATGTGGGTGCATACCCGCTTGAGCAGTGC-AGAACGTC 295732 Query 105205 TAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATG---TATTCAT 105261 |||| ||| || ||||| |||| |||||||||| || | || |||| | |||| Sbjct 295733 AAATACGAGGCATCGTCCGATTGCAGTCGGTGTTCAAGGATTAGCAGATGCTTTCTTCAG 295792 Query 105262 TCTTTGTCGCCACGCATTTG--ATTCCG-ACGAAGCGAAGGAAATCAATGCGCGCATATT 105318 || | | | |||||| | |||| || |||| | ||| || || || Sbjct 295793 GCTGAGGTGTC---CATTTGGAAGTCCGTACTCCCGGAAGTTGAACAA---GCAAATCTT 295846 Query 105319 TGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCC 105378 | |||| || || || || || |||||| | | |||||||| || || || || Sbjct 295847 TCAGACGATCTACCATGCAGCCCTTGAGCAGTCTGTGGAGTTGGCTCAGAAAGACGGCCC 295906 Query 105379 ATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGG 105437 |||| || ||||| || || |||| || ||||| || ||||| | ||||||||||| Sbjct 295907 ATATTCGACGTTTGAAGGCTCGCCAGGCTCGCAAGGTGTTCTTCAGTATGATATGTGGG 295965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260595858720