Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq12 170 5e-37 seq1 165 2e-35 >seq12 Length=1682134 Score = 170 bits (188), Expect = 5e-37 Identities = 169/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||| | ||| ||||| || || || |||| ||||| || | ||||||||| || Sbjct 1445810 TCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGACAAAGTTCTGCC 1445869 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||| || | |||||| ||||| ||||| | || || || || || || || || ||||| Sbjct 1445870 ATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGTGGGATTCCCTCCTT 1445929 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||||||||||||| ||| || |||||||| || | ||||| || || ||||| Sbjct 1445930 GTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGACTCCACCTCCAAGGTGAT 1445989 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| || |||||||| || | ||| | ||||||||| Sbjct 1445990 AGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCATTTT 1446028 >seq1 Length=1824870 Score = 165 bits (182), Expect = 2e-35 Identities = 168/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||| | ||| ||||| ||||| || || | ||||| || | ||||||||| || Sbjct 738141 TCTCAAGACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAGTCAGACAAAGTTCTACC 738082 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||| || | |||||| ||||| ||||| | || ||||| || || ||||| || ||||| Sbjct 738081 ATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGGAATTCCCTCCTT 738022 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 || |||||||||||||| ||| || ||||| || || | ||||| || || ||||| Sbjct 738021 ATCCTGGATCTTTTGCTTGACATTGTCAATGGTATCGGAAGACTCCACCTCCAAGGTGAT 737962 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||||||| || || | ||| | ||||||||| Sbjct 737961 AGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTT 737923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530772179432