Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq12 217 2e-51
seq23 190 3e-43
>seq12
Length=1682134
Score = 217 bits (240), Expect = 2e-51
Identities = 585/886 (66%), Gaps = 14/886 (2%)
Strand=Plus/Plus
Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062
|| || |||||||| | ||| || ||||| ||||| ||| | ||| || | | |
Sbjct 1116089 ACACGCTTCATAAATAAATCTGGAATCCAAAGAGCTGGAAACAAATCACGTGCACGAATC 1116148
Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122
|| || || || ||||||| | | ||||| ||| || | ||||||| |||||| ||
Sbjct 1116149 TCCTCTTTACCATGATTCTTTCTGATATCGATAAAGTCGAAGATATCAGCATGCCAAGGC 1116208
Query 78123 TCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCG 78182
|| | || || || || | || |||| || ||||| || ||||| | |||||| ||
Sbjct 1116209 TCCAAGTAAATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGATCCACATATCTAGCA 1116268
Query 78183 GTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAA 78242
|| | || | || | | ||| ||||| |||||||| ||||| ||||| || || | |
Sbjct 1116269 GTACTGTTGAACACACGAACCATCGGAATTATACCGTTGGATGTACCATTAGTACCGGCA 1116328
Query 78243 ATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTA 78302
||||| ||| | | ||||| || |||| | || || || || || |||||
Sbjct 1116329 ATATACGAACCAGTGGAACGAATGTTGTGAATGTGAAGACCAATACCACCAGCAGTCTTA 1116388
Query 78303 GATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATG 78362
|| || | ||| || ||||||| |||||||||||||| || ||| |||||| ||||
Sbjct 1116389 GAAATCAAAGCACACTGTTTCAAAGTATCGTAGATACCTTCAATAGAGTCATCTTTCATT 1116448
Query 78363 TTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGA 78422
|| | || || ||||| ||| | | ||| || ||||| || || || ||
Sbjct 1116449 GCAACTAAGAAGCATGATGACATCTGAGGGCGTGGAGTACCAGCATTGAACAACGTTGGT 1116508
Query 78423 GATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATG-TTTCAATAGCT---GATTC 78478
|||||||| || || || | | || | | | |||| || ||| | || || |
Sbjct 1116509 GATGCATGTGTGAAGTATCTCTTTGACATCAAGTCATATGATTCCAACACCTTAGGAATA 1116568
Query 78479 T-ATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAA 78537
| || || |||||| || || || || | ||| | | || || |||||||||
Sbjct 1116569 TCATCACC-----ATGAATACCGACGGCCACTCTCATAAGAAGGTGTTGTGGTCTTTCAG 1116623
Query 78538 CCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGT 78597
| |||| ||| ||| |||||| || || ||||||||| || |||||||| ||||
Sbjct 1116624 CAACCTTACCATTAATTCTCAACAGATAAGAACGTTCCAAAGTCTTGAAACCAAAGTAGT 1116683
Query 78598 TGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAA 78657
|||| ||||| | |||||| |||| | || || | | ||| || | | |||
Sbjct 1116684 TGTAACTGAAGTCACGGTCGTAATTAATGGCTGAGTTCAACTCATCCTTATGCTCCATAA 1116743
Query 78658 CAATATCCATGACAGTAGTTGAAATAATAGGAGA-TCGTACACCATTTTTAGGATTAACA 78716
|||| | || | ||||| |||||||| | | | | ||| |||||
Sbjct 1116744 CAATCTTATAAACCTCATCAGAAATCATAGGAGACTTCTTCTGGGTCTTT-GGATTGTAG 1116802
Query 78717 TAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTA 78776
||||| ||| ||| || || |||||| || | || || || | |||||| | |||
Sbjct 1116803 TAGTTGTATAGATCCTCTATAACATCAGAGAAAGGCTTCTTAGTCTGCTTGTGCAAATTT 1116862
Query 78777 GATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGT-GGC 78835
|| | || | ||| || || | | ||||||| || ||||| ||| || || || ||
Sbjct 1116863 GAGATTGCAAGTCTAGCGGCCAAAGTAGCATAGTCTGGATGCATTGTGGT-CATGTATGC 1116921
Query 78836 TGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCA 78881
||| |||| || | ||| | || ||||| || || || || |||
Sbjct 1116922 TGCAGTTTCAGCAGTCAAATTGTCCAACTCAATGGTGGTAACACCA 1116967
Score = 183 bits (202), Expect = 4e-41
Identities = 524/791 (66%), Gaps = 15/791 (2%)
Strand=Plus/Plus
Query 76811 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 76870
|||||||| ||||||||||| ||||| | ||| |||| || || || ||||||
Sbjct 1114882 TGTACGTAAGTAGTACATACCTGTTTTCAAGCCCTTCTTCCAGCCATAAAAGTGCATGGA 1114941
Query 76871 TGTCAGTTTGGA-ATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGA 76929
|||| ||| ||| | | | || | ||| || ||||| || ||| || ||
Sbjct 1114942 AGTCAATTTACCCATAGTTGGTGACTGCAA-ATGGATGTTCATAGATTGAGACTGGCAGA 1115000
Query 76930 TGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAG 76989
|| | || || |||||||| ||||| | || | | ||| |||| ||| ||||||| |
Sbjct 1115001 TGTATGCGCCCCTATCAGCAGCCATATCGATGACAGACTTCTGAGAAATCTCCCAAACTG 1115060
Query 76990 TTTTGAA-AACTTGTTTGATATCATCTGGAAGGTTTGTA---TTTTGAATGGAACCACCA 77045
| || | ||||| || ||| | ||| |||| ||||| || ||||| |||||
Sbjct 1115061 TCCTGTACAACTTCTT-GATCTTATCGGGAACGTTTGGCAAGTTCTGAATAGAACCGTTG 1115119
Query 77046 TC-TGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCT 77104
|| ||| || || ||||| || |||| ||||| | | | | || | | | ||||
Sbjct 1115120 TCGTGA-ATGATGAAGTTCTTCATTGCATCGTTCCATATTCCCATGTCAATAAGATCTCT 1115178
Query 77105 AAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATT 77164
| | | ||||||||| || || ||||| |||| | ||||| | || || ||
Sbjct 1115179 CAACATGTAAGGATTAACGATCTGGAATTCACCAGCAAGAACTCTTCTCTGATAGATGTT 1115238
Query 77165 ACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGG 77224
| ||| ||||||| | | |||| || | |||| ||| || | |||||||||||| ||
Sbjct 1115239 AGAGGTGAATGGTTCGAAACATTCGTTATAACCCATAATCTGGGAAGTAGAAGCAGTCGG 1115298
Query 77225 CATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTT-CTGATTTTATCTTTTAGAT 77283
||||||||||||||| | | ||||| |||||| || || || ||| | || |||
Sbjct 1115299 CATAGGTGCCACCAAAAGAGAGTTTCTAAGACCA-GTCTTGGCAATCTTAGCCTTCAGAG 1115357
Query 77284 ATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGT 77343
| ||| ||||| ||||| | ||| | ||| | ||| ||||||||||| || |
Sbjct 1115358 TATCCCAGTCCCACAGATCCGTAGGCTTTTTGTTCCACATATCATATTGTAGAATACCCT 1115417
Query 77344 TACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAAC 77403
| ||| || || | |||||| | ||||| || ||| |||| || |
Sbjct 1115418 TTGAAGCTGGAGAGCCTTCATATGTCTGATAAGTACCCTCTTCCACAGCAAGCTGGTTGG 1115477
Query 77404 TCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTT 77463
| |||||||| ||| ||| | || || || |||| | || || || |||| |
Sbjct 1115478 ATTCCTCCAATGCAGCGTGATACAAGGTCTCAAATATCTGAATGTTAAGCTCCCGTGCAT 1115537
Query 77464 CAATACTATCAAACGGATAATGTAA--AAGAATAAAGGCATCTGCTAATCCCTGAACTCC 77521
| || ||||| || || | ||| | ||| |||| ||| || | ||||| | ||
Sbjct 1115538 CTGGACAGTCAAAAGG-TAGTCTAAGCATGAA-GAAGGTATCAGCAAGACCCTGGATACC 1115595
Query 77522 AATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATT 77581
|| | |||||||||| | |||| | ||||| | || || |||| ||||| |||||
Sbjct 1115596 AAGAGCAATAGGTCTGTTTCTCATGTTGGAGTTACGGGCCTCAGGAACTGGATAGTAATT 1115655
Query 77582 AATGTCTATAA 77592
|||| ||||
Sbjct 1115656 TCTGTCAATAA 1115666
>seq23
Length=1344041
Score = 190 bits (210), Expect = 3e-43
Identities = 568/866 (66%), Gaps = 18/866 (2%)
Strand=Plus/Minus
Query 47871 TTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTA 47930
||||| || |||||||| || || |||| || ||||||||||| || || ||||||||
Sbjct 978472 TTCTCAAAGAAATTAGTCTTACCAGCCAAGGAGATATTTTCCATGAAGTCGAATGGATTT 978413
Query 47931 ACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCT 47990
| || |||| || | |||| ||| | || || || || ||| ||| ||
Sbjct 978412 GTGACGTTGTAAACCTTCTCGCATCCCAATGCGATAAGCAACCTGTCGGCACAGAACTCA 978353
Query 47991 ATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTA 48050
| || |||||| || | ||||| || | | |||||| ||||| || |
Sbjct 978352 ACGTACTGAGCCATCATATCGAAGTTCATACCGAGTAAAGAAACTGGAAGAGCGTCTCTC 978293
Query 48051 -AGAAACTCTTGTTCGATAGTGACAGCATC---CACTATTATCGATGTTACCGTTTCCTC 48106
||||| | || | | ||| | ||||| || || ||| || || || | |||
Sbjct 978292 CAGAAAGTTTTCT-CAATATTAACAGCCTCGGTCATGATTCTCT-TGATAATGA--CCTT 978237
Query 48107 ACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTC 48166
||||||||||| | ||| || |||| | ||||||||||| ||| ||||| ||
Sbjct 978236 ACTTGGTGGATGCTTCAAGTGAGAGAACAAAAGGCATGCAAAATCGGTATGTAGACCCTC 978177
Query 48167 ATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAG 48226
|||||| | || | |||||||| || || || || ||||| | || | || || |
Sbjct 978176 ATCTCTGCAGATAAGCTCGTTAGAGAACGTAAGGCCTGGCATCAAACCTCTCTTCTTCAA 978117
Query 48227 CCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGT 48286
||| || || | || || |||||||| || || | ||||| | ||| ||||| ||
Sbjct 978116 CCAGAAGATGGAGGCAAACGATCCAGAGAAAAACACACCTTCAATGGCAGCAAAAGCAAC 978057
Query 48287 AAGTCTCTCTCCGT---AACTGGCTTCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTT 48343
| |||||| | | || | || |||| |||||| | ||||| ||||||
Sbjct 978056 CAATCTCTCAGCATACAAAGCATCATCATTGTTTATCCATCTCAAAGCCCATAAAGCCTT 977997
Query 48344 CTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATC 48403
|| ||| | | || ||||| | || ||||| || | ||| || || | ||
Sbjct 977996 CTCCTTAATAGGTGGAATTGTATGGATGGCATTGAACAAGTAGTCGGACTCTTTCTTGTC 977937
Query 48404 TTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCAT 48463
| | || || || || ||||| ||| | || ||||| || || |||| ||
Sbjct 977936 AGTGATATAGGTCTCGATCAAAAGGGAATAAGTCTCAGAGTGGATGTTCTCAACCATAAT 977877
Query 48464 CTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTC--A 48521
||| || || || || ||| || || | | ||| |||| | | || || ||||
Sbjct 977876 CTGGAAACCATAGAAGGCTCTTGCCTCAGGTAACTGCACCTGC-TTCATAA-AGTTCTGT 977819
Query 48522 GCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATA 48581
||||||||||||| || || ||||| ||| ||||| || || || ||| | ||
Sbjct 977818 GCCAAATTCTCATCGACAATACCATCTGAAGCGGCAAAGAAGGCCAAGACACGAGAGATG 977759
Query 48582 AAATATTTTTCGTTGGAAGTCAGTTT---ATTCCAGTCATTGATATCTTTTGATATATCT 48638
|| ||| | || |||| | ||| || ||||||||| | | ||| ||||| | |||
Sbjct 977758 AAGTATCTCTCATTGGCATTCATCTTGTCATTCCAGTCGGTCAAATCCTTTGAGAGATCG 977699
Query 48639 ACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTG 48698
| || || || ||||| || || ||||| || || || ||||| | |||||||||| |
Sbjct 977698 ATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCATATATCATCG 977639
Query 48699 TATTGGATTGGGAAAATAACAAATCT 48724
|| || || ||||| || || |||||
Sbjct 977638 TACTGAATAGGGAACATCACGAATCT 977613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668556865920
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