Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq23 221 2e-52
seq12 205 1e-47
>seq23
Length=1344041
Score = 221 bits (244), Expect = 2e-52
Identities = 576/867 (66%), Gaps = 20/867 (2%)
Strand=Plus/Minus
Query 46360 TTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAACGGATTA 46419
||||| || |||||||| || || |||| || ||||||||||| || || || |||||
Sbjct 978472 TTCTCAAAGAAATTAGTCTTACCAGCCAAGGAGATATTTTCCATGAAGTCGAATGGATTT 978413
Query 46420 GTAACATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCT 46479
|| || || |||| || | |||| ||| | || || || || ||| ||| ||
Sbjct 978412 GTGACGTTGTAAACCTTCTCGCATCCCAATGCGATAAGCAACCTGTCGGCACAGAACTCA 978353
Query 46480 ATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTA 46539
| ||| |||||| || | ||||| || | | || || ||||| || |
Sbjct 978352 ACGTACTGAGCCATCATATCGAAGTTCATACCGAGTAAAGAAACTGGAAGAGCGTCTCTC 978293
Query 46540 -AGAAACTCTTGTTCAATAGTGACAGCATCCG--AT-ATTATCGATGTTACTGTTTCCTC 46595
||||| | || | ||||| | ||||| || | || ||| || || || || |||
Sbjct 978292 CAGAAAGTTTTCT-CAATATTAACAGCCTCGGTCATGATTCTCT-TGATAATGA--CCTT 978237
Query 46596 ACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTC 46655
||||||||||||| |||| || |||| | ||||||||||| ||| || || ||
Sbjct 978236 ACTTGGTGGATGCTTCAAGTGAGAGAACAAAAGGCATGCAAAATCGGTATGTAGACCCTC 978177
Query 46656 ATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAG 46715
|||||| | || | |||||||| || || || || ||||| | || | ||| || |
Sbjct 978176 ATCTCTGCAGATAAGCTCGTTAGAGAACGTAAGGCCTGGCATCAAACCTCTCTTCTTCAA 978117
Query 46716 CCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGAC 46775
||| || || | || || |||||||| || || | ||||| | || || || || ||
Sbjct 978116 CCAGAAGATGGAGGCAAACGATCCAGAGAAAAACACACCTTCAATGGCAGCAAAAGCAAC 978057
Query 46776 AAGTCTCTCTCCGT---AACTGGCATCATTATGAATCCACCTTTGAGCCCAATCAGCCTT 46832
| |||||| | | || ||||||| | ||||| || |||||| ||||||
Sbjct 978056 CAATCTCTCAGCATACAAAGCATCATCATTGTTTATCCATCTCAAAGCCCATAAAGCCTT 977997
Query 46833 TTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATC 46892
| ||| | | || ||||| | || ||||| || | ||| || | | ||
Sbjct 977996 CTCCTTAATAGGTGGAATTGTATGGATGGCATTGAACAAGTAGTCGGACTCTTTCTTGTC 977937
Query 46893 TTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCAT 46952
| | ||| || || || ||||| ||| | || || || ||||| |||| ||
Sbjct 977936 AGTGATATAGGTCTCGATCAAAAGGGAATAAGTCTCAGAGTGGATGTTCTCAACCATAAT 977877
Query 46953 CTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCT-CTGTACAAAATCGTTC-- 47009
||| || || || || |||||| |||| | ||| |||| || | ||| ||||
Sbjct 977876 CTGGAAACCATAGAAGGCTCTTGCCTCAGGTAACTGCACCTGCTTCATAAA---GTTCTG 977820
Query 47010 AGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAAT 47069
| ||||||||||| || || ||||| ||| ||||| || ||||| ||| | ||
Sbjct 977819 TGCCAAATTCTCATCGACAATACCATCTGAAGCGGCAAAGAAGGCCAAGACACGAGAGAT 977760
Query 47070 AAAATATTTTTCATCGGTAGTCAGTTT---ATTCCAGTCATTGATATCTTTTGATATATC 47126
|| ||| | |||| || | ||| || ||||||||| | | ||| ||||| | |||
Sbjct 977759 GAAGTATCTCTCATTGGCATTCATCTTGTCATTCCAGTCGGTCAAATCCTTTGAGAGATC 977700
Query 47127 TACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACG 47186
| || || || |||||||| || ||||| || || || ||||| | ||||||||||
Sbjct 977699 GATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCATATATCATC 977640
Query 47187 ATATTGGATCGGAAAAATAACAAATCT 47213
|| || || || || || || |||||
Sbjct 977639 GTACTGAATAGGGAACATCACGAATCT 977613
>seq12
Length=1682134
Score = 205 bits (226), Expect = 1e-47
Identities = 581/883 (66%), Gaps = 10/883 (1%)
Strand=Plus/Plus
Query 76598 ACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGT 76657
|| || |||||||| | ||| || ||||| ||||| ||| | ||| || | | |
Sbjct 1116089 ACACGCTTCATAAATAAATCTGGAATCCAAAGAGCTGGAAACAAATCACGTGCACGAATC 1116148
Query 76658 TCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGT 76717
|| || || || ||||||| | | ||| | || || | ||||||| |||||| ||
Sbjct 1116149 TCCTCTTTACCATGATTCTTTCTGATATCGATAAAGTCGAAGATATCAGCATGCCAAGGC 1116208
Query 76718 TCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCA 76777
|| | || || || || |||| |||| || ||||| || ||||| | |||||| |||
Sbjct 1116209 TCCAAGTAAATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGATCCACATATCTAGCA 1116268
Query 76778 GTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAA 76837
|| | || | || | | ||| ||||| || ||||| ||||||||||| || || | |
Sbjct 1116269 GTACTGTTGAACACACGAACCATCGGAATTATACCGTTGGATGTACCATTAGTACCGGCA 1116328
Query 76838 ATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTA 76897
||||| ||| | |||||| || ||| || || || || || || | |||
Sbjct 1116329 ATATACGAACCAGTGGAACGAATGTTGTGAATGTGAAGACCAATACCACCAGCAGTCTTA 1116388
Query 76898 GAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATG 76957
|| || | |||||| ||||||| || || ||||| || || ||| ||||| ||||
Sbjct 1116389 GAAATCAAAGCACACTGTTTCAAAGTATCGTAGATACCTTCAATAGAGTCATCTTTCATT 1116448
Query 76958 TTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGA 77017
|| | || || ||||| ||| | | ||| || ||||| ||||| || ||
Sbjct 1116449 GCAACTAAGAAGCATGATGACATCTGAGGGCGTGGAGTACCAGCATTGAACAACGTTGGT 1116508
Query 77018 GATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTT--CTA 77075
|||||||| ||||| || | | || | | | |||| ||| ||| ||| |
Sbjct 1116509 GATGCATGTGTGAAGTATCTCTTTGACATCAAGTCATATGATTC--CAACACCTTAGGAA 1116566
Query 77076 TATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAG 77135
|||| |||||| || || || || | ||| | | || || |||| ||| ||
Sbjct 1116567 TATCATCACCATGAATACCGACGGCCACTCTCATAAGAAGGTGTTGTGGTCTTTCAGCAA 1116626
Query 77136 TCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 77195
|||| ||| ||| |||||| || || ||||||||| || |||||||| |||||||
Sbjct 1116627 CCTTACCATTAATTCTCAACAGATAAGAACGTTCCAAAGTCTTGAAACCAAAGTAGTTGT 1116686
Query 77196 ATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAA 77255
| ||||| | |||||| |||| | || || | | ||||||| | ||||||
Sbjct 1116687 AACTGAAGTCACGGTCGTAATTAATGGCTGAGTTCAACTCATCCTTATGCTCCATAACAA 1116746
Query 77256 TATCCATGACAGTGGT-AGAAATAATTGGAGATCGTATTC-CATTTTTAGGATTAACATA 77313
| | || | | | |||||| || ||||| | | ||| | || ||||| ||
Sbjct 1116747 TCT-TATAAACCTCATCAGAAATCATAGGAGA-CTTCTTCTGGGTCTTTGGATTGTAGTA 1116804
Query 77314 GTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGA 77373
||| ||| || || || || || || | || || || | |||||| | ||| ||
Sbjct 1116805 GTTGTATAGATCCTCTATAACATCAGAGAAAGGCTTCTTAGTCTGCTTGTGCAAATTTGA 1116864
Query 77374 TACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGT-GGCTG 77432
| || | |||||| || | | | |||||||| ||||| ||| || || || ||||
Sbjct 1116865 GATTGCAAGTCTAGCGGCCAAAGTAGCATAGTCTGGATGCATTGTGGT-CATGTATGCTG 1116923
Query 77433 CTATTTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCC 77475
| |||| || | ||| | || || || || || ||||| ||
Sbjct 1116924 CAGTTTCAGCAGTCAAATTGTCCAACTCAATGGTGGTAACACC 1116966
Score = 170 bits (188), Expect = 3e-37
Identities = 519/790 (66%), Gaps = 13/790 (2%)
Strand=Plus/Plus
Query 75406 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 75465
|||||||| ||||||||||| ||||| | ||| |||| || || || ||||||
Sbjct 1114882 TGTACGTAAGTAGTACATACCTGTTTTCAAGCCCTTCTTCCAGCCATAAAAGTGCATGGA 1114941
Query 75466 TGTTAGTTTGGA-ATAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGA 75524
|| | ||| ||| | | | || | ||| || ||||| || ||| || ||
Sbjct 1114942 AGTCAATTTACCCATAGTTGGTGACTGCAA-ATGGATGTTCATAGATTGAGACTGGCAGA 1115000
Query 75525 TGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAG 75584
|| | || || |||||||| ||||| | || | | ||| |||| ||| ||||||| |
Sbjct 1115001 TGTATGCGCCCCTATCAGCAGCCATATCGATGACAGACTTCTGAGAAATCTCCCAAACTG 1115060
Query 75585 TTTTGAA-AACTTGTTTGATATCATCTGGAAGATTTGTA---TTTTGAATGGATCCGCCA 75640
| || | ||||| || ||| | ||| |||| |||| || ||||| || |||
Sbjct 1115061 TCCTGTACAACTTCTT-GATCTTATCGGGAACGTTTGGCAAGTTCTGAATAGAACCGTTG 1115119
Query 75641 TCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTA 75700
|| || || ||||| || |||| ||||| | | | || | | | ||||
Sbjct 1115120 TCGTGAATGATGAAGTTCTTCATTGCATCGTTCCATATTCCCATGTCAATAAGATCTCTC 1115179
Query 75701 AGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTA 75760
| | | ||||||||| || || ||||| |||| | ||||||| || || |||
Sbjct 1115180 AACATGTAAGGATTAACGATCTGGAATTCACCAGCAAGAACTCTTCTCTGATAGATGTTA 1115239
Query 75761 CTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGC 75820
||| ||||||| | | |||| || | |||| ||| || | ||| ||||||||||||
Sbjct 1115240 GAGGTGAATGGTTCGAAACATTCGTTATAACCCATAATCTGGGAAGTAGAAGCAGTCGGC 1115299
Query 75821 ATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTT-CTGATTTTATCTTTTAGATA 75879
|||||||||||||| | | ||||| |||||| || || || ||| | || |||
Sbjct 1115300 ATAGGTGCCACCAAAAGAGAGTTTCTAAGACCA-GTCTTGGCAATCTTAGCCTTCAGAGT 1115358
Query 75880 TTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTT 75939
| ||| ||||| ||||| | || | ||| | ||| ||||||||||| || ||
Sbjct 1115359 ATCCCAGTCCCACAGATCCGTAGGCTTTTTGTTCCACATATCATATTGTAGAATACCCTT 1115418
Query 75940 GCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACT 75999
||| || || | |||||| | ||||| || || | |||| || | |
Sbjct 1115419 TGAAGCTGGAGAGCCTTCATATGTCTGATAAGTACCCTCTTCCACAGCAAGCTGGTTGGA 1115478
Query 76000 CGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTC 76059
|||| || ||| ||| ||| | || || || |||| | ||||| || | || ||
Sbjct 1115479 TTCCTCCAATGCAGCGTGATACAAGGTCTCAAATATCTGAATGTTAAGCTCCCGTGCATC 1115538
Query 76060 AAGACTATCAAAAGGATAATGTAA--AAGAATAAATGCATCTGCTAGTCCCTGAACTCCA 76117
||| |||||||| || | ||| | ||| || | ||| || || ||||| | |||
Sbjct 1115539 TGGACAGTCAAAAGG-TAGTCTAAGCATGAA-GAAGGTATCAGCAAGACCCTGGATACCA 1115596
Query 76118 ATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTA 76177
| | |||||||||| | |||| | ||||| | || || |||| || || |||||
Sbjct 1115597 AGAGCAATAGGTCTGTTTCTCATGTTGGAGTTACGGGCCTCAGGAACTGGATAGTAATTT 1115656
Query 76178 ATATCTATAA 76187
| || ||||
Sbjct 1115657 CTGTCAATAA 1115666
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712934150472960
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