Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq12 134 3e-26 seq1 107 4e-18 >seq12 Length=1682134 Score = 134 bits (148), Expect = 3e-26 Identities = 157/211 (74%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||||||||| || ||||||||||| || | |||||||| ||||| || | Sbjct 1445819 CAAG-TGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGACAAAGTTCTGCCATCCTCCA 1445877 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || ||||| | |||||||| || | | |||||| ||||| ||||| | Sbjct 1445878 ACTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCTTGGA 1445937 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||||| |||||| | || | | |||| ||| ||| || || | || ||||| || | Sbjct 1445938 TCTTTTGCTTGACATTGTCAATGGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTTAC 1445997 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || | |||||| ||||| | |||||||| Sbjct 1445998 CGGTCAAAGTCTTAACGAAAATTTGCATTTT 1446028 >seq1 Length=1824870 Score = 107 bits (118), Expect = 4e-18 Identities = 151/211 (72%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| || || || |||||||| || | |||||||| ||||| || | Sbjct 738132 CAAG-TGAAGAGTAGATTCCTTCTGAATGTTGTAGTCAGACAAAGTTCTACCATCCTCCA 738074 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || ||||| | ||||| || || | | ||||| ||||| || || | Sbjct 738073 ACTGCTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGGAATTCCCTCCTTATCCTGGA 738014 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||||| |||||| | || | | | || ||| ||| || || | || ||||| || | Sbjct 738013 TCTTTTGCTTGACATTGTCAATGGTATCGGAAGACTCCACCTCCAAGGTGATAGTCTTAC 737954 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 |||| | ||||| ||||| | |||||||| Sbjct 737953 CCGTCAAGGTCTTAACGAAAATTTGCATTTT 737923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820386066788