Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq24 141 2e-28
seq12 141 2e-28
seq1 138 2e-27
>seq24
Length=1088928
Score = 141 bits (156), Expect = 2e-28
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 316990 TCATGCTCAACATATGCAGTTTTCAGAATATCCTTCGTCGGGAACCCTTCCAACTGACCG 317049
|||||||||||||| ||||| | || | |||| | ||||| ||||| | ||| |||
Sbjct 722284 TCATGCTCAACATACACAGTTCTAAGGACGTCCTGAGATGGGAAACCTTCAACCTGGCCG 722225
Query 317050 TTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATAC 317109
|| | || ||| ||| || || ||||| |||||||| || |||||||||||||| ||
Sbjct 722224 TTAGCCATTGCCTTCAGAAGGGTAGACTTACCAGCACCGTTAGGGCCGCAAAGACCGTAT 722165
Query 317110 CGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATATGCC 317169
| |||| |||||| | | | | ||||||| |||||||||| |||| || |||
Sbjct 722164 CTTCTTCCTCTCTTCAAACGCAGCTGAGATTTGTTCAAAAGAATCTTAGCACCGTAAGCC 722105
Query 317170 AGAGAGAACTCACAATCACACAGGTCCTCGCCG 317202
| |||||||||||| | ||| || ||||| |||
Sbjct 722104 AAAGAGAACTCACAGTTACAAAGATCCTCACCG 722072
>seq12
Length=1682134
Score = 141 bits (156), Expect = 2e-28
Identities = 150/198 (76%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| || |||||||||||||| | | || | ||||||||| | || || || ||||||
Sbjct 1445835 TCCTTCTGGATGTTGTAGTCCGACAAAGTTCTGCCATCCTCCAACTGCTTACCAGCAAAG 1445894
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
||||| | || || || || || ||||||||||||||||||||| || || |
Sbjct 1445895 ATCAATCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCTTGGATCTTTTGCTTGACATTG 1445954
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || ||||| |||| || || || | ||||| |||||||| |||||||||||||||
Sbjct 1445955 TCAATGGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTTACCGGTCAAAGTCTTAACG 1446014
Query 283089 AATATCTGCATTTTCATA 283106
|| || |||||||| |||
Sbjct 1446015 AAAATTTGCATTTTGATA 1446032
>seq1
Length=1824870
Score = 138 bits (152), Expect = 2e-27
Identities = 151/201 (75%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| || || ||||||||||||| | || | |||||||| | || || || |||||
Sbjct 738117 TTCCTTCTGAATGTTGTAGTCAGACAAAGTTCTACCATCCTCCAACTGCTTACCAGCAAA 738058
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | ||||| ||| ||||| |||||||| || ||||||||| || || |
Sbjct 738057 GATCAATCTCTGTTGATCAGGTGGAATTCCCTCCTTATCCTGGATCTTTTGCTTGACATT 737998
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || || || |||| || || || | ||||| |||||||||||||| ||||||||
Sbjct 737997 GTCAATGGTATCGGAAGACTCCACCTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAAC 737938
Query 283088 GAATATCTGCATTTTCATATA 283108
||| || |||||||| ||||
Sbjct 737937 GAAAATTTGCATTTTTCTATA 737917
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738824482312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |