Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq24 141 2e-28 seq12 141 2e-28 seq1 138 2e-27 >seq24 Length=1088928 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 316990 TCATGCTCAACATATGCAGTTTTCAGAATATCCTTCGTCGGGAACCCTTCCAACTGACCG 317049 |||||||||||||| ||||| | || | |||| | ||||| ||||| | ||| ||| Sbjct 722284 TCATGCTCAACATACACAGTTCTAAGGACGTCCTGAGATGGGAAACCTTCAACCTGGCCG 722225 Query 317050 TTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATAC 317109 || | || ||| ||| || || ||||| |||||||| || |||||||||||||| || Sbjct 722224 TTAGCCATTGCCTTCAGAAGGGTAGACTTACCAGCACCGTTAGGGCCGCAAAGACCGTAT 722165 Query 317110 CGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATATGCC 317169 | |||| |||||| | | | | ||||||| |||||||||| |||| || ||| Sbjct 722164 CTTCTTCCTCTCTTCAAACGCAGCTGAGATTTGTTCAAAAGAATCTTAGCACCGTAAGCC 722105 Query 317170 AGAGAGAACTCACAATCACACAGGTCCTCGCCG 317202 | |||||||||||| | ||| || ||||| ||| Sbjct 722104 AAAGAGAACTCACAGTTACAAAGATCCTCACCG 722072 >seq12 Length=1682134 Score = 141 bits (156), Expect = 2e-28 Identities = 150/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || |||||||||||||| | | || | ||||||||| | || || || |||||| Sbjct 1445835 TCCTTCTGGATGTTGTAGTCCGACAAAGTTCTGCCATCCTCCAACTGCTTACCAGCAAAG 1445894 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | || || || || || ||||||||||||||||||||| || || | Sbjct 1445895 ATCAATCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCTTGGATCTTTTGCTTGACATTG 1445954 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || ||||| |||| || || || | ||||| |||||||| ||||||||||||||| Sbjct 1445955 TCAATGGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTTACCGGTCAAAGTCTTAACG 1446014 Query 283089 AATATCTGCATTTTCATA 283106 || || |||||||| ||| Sbjct 1446015 AAAATTTGCATTTTGATA 1446032 >seq1 Length=1824870 Score = 138 bits (152), Expect = 2e-27 Identities = 151/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| || || ||||||||||||| | || | |||||||| | || || || ||||| Sbjct 738117 TTCCTTCTGAATGTTGTAGTCAGACAAAGTTCTACCATCCTCCAACTGCTTACCAGCAAA 738058 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | ||||| ||| ||||| |||||||| || ||||||||| || || | Sbjct 738057 GATCAATCTCTGTTGATCAGGTGGAATTCCCTCCTTATCCTGGATCTTTTGCTTGACATT 737998 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || || || |||| || || || | ||||| |||||||||||||| |||||||| Sbjct 737997 GTCAATGGTATCGGAAGACTCCACCTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAAC 737938 Query 283088 GAATATCTGCATTTTCATATA 283108 ||| || |||||||| |||| Sbjct 737937 GAAAATTTGCATTTTTCTATA 737917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738824482312