Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq12 134 3e-26
seq1 116 9e-21
>seq12
Length=1682134
Score = 134 bits (148), Expect = 3e-26
Identities = 167/228 (73%), Gaps = 3/228 (1%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| |||||||||| || ||| | || || || || |||||| | ||||||||
Sbjct 1446028 AAAATGC---AAATTTTCGTTAAGACTTTGACCGGTAAGACTATCACCTTGGAGGTGGAG 1445972
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| |||||||| || || ||||| |||||||| || ||||| || |||||||| ||
Sbjct 1445971 TCTTCCGACACCATTGACAATGTCAAGCAAAAGATCCAAGACAAGGAGGGAATCCCACCA 1445912
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|| ||||| || | ||||| || || || ||| | || ||||| || ||| | | ||
Sbjct 1445911 GATCAGCAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCGGAC 1445852
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| ||| |||| || || || || || || | || |||||| | |||
Sbjct 1445851 TACAACATCCAGAAGGAGTCTACTCTTCACTTGGTCTTGAGATTGAGA 1445804
>seq1
Length=1824870
Score = 116 bits (128), Expect = 9e-21
Identities = 163/228 (71%), Gaps = 3/228 (1%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| |||||||||| || || | || || || || |||||| | ||||||||
Sbjct 737923 AAAATGC---AAATTTTCGTTAAGACCTTGACGGGTAAGACTATCACCTTGGAGGTGGAG 737979
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| || ||||| || || ||||| |||||||| ||||| || || ||||| || ||
Sbjct 737980 TCTTCCGATACCATTGACAATGTCAAGCAAAAGATCCAGGATAAGGAGGGAATTCCACCT 738039
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|| || || || | ||||| || || || ||| | || ||||| || ||| | | ||
Sbjct 738040 GATCAACAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGTAGAACTTTGTCTGAC 738099
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| ||| | || || ||||| || || || | || |||||| | |||
Sbjct 738100 TACAACATTCAGAAGGAATCTACTCTTCACTTGGTCTTGAGATTGAGA 738147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730768161432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |