Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq12 134 3e-26 seq1 116 9e-21 >seq12 Length=1682134 Score = 134 bits (148), Expect = 3e-26 Identities = 167/228 (73%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| |||||||||| || ||| | || || || || |||||| | |||||||| Sbjct 1446028 AAAATGC---AAATTTTCGTTAAGACTTTGACCGGTAAGACTATCACCTTGGAGGTGGAG 1445972 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || |||||||| || || ||||| |||||||| || ||||| || |||||||| || Sbjct 1445971 TCTTCCGACACCATTGACAATGTCAAGCAAAAGATCCAAGACAAGGAGGGAATCCCACCA 1445912 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || ||||| || | ||||| || || || ||| | || ||||| || ||| | | || Sbjct 1445911 GATCAGCAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCGGAC 1445852 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || ||| |||| || || || || || || | || |||||| | ||| Sbjct 1445851 TACAACATCCAGAAGGAGTCTACTCTTCACTTGGTCTTGAGATTGAGA 1445804 >seq1 Length=1824870 Score = 116 bits (128), Expect = 9e-21 Identities = 163/228 (71%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| |||||||||| || || | || || || || |||||| | |||||||| Sbjct 737923 AAAATGC---AAATTTTCGTTAAGACCTTGACGGGTAAGACTATCACCTTGGAGGTGGAG 737979 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || || ||||| || || ||||| |||||||| ||||| || || ||||| || || Sbjct 737980 TCTTCCGATACCATTGACAATGTCAAGCAAAAGATCCAGGATAAGGAGGGAATTCCACCT 738039 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || || || || | ||||| || || || ||| | || ||||| || ||| | | || Sbjct 738040 GATCAACAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGTAGAACTTTGTCTGAC 738099 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || ||| | || || ||||| || || || | || |||||| | ||| Sbjct 738100 TACAACATTCAGAAGGAATCTACTCTTCACTTGGTCTTGAGATTGAGA 738147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730768161432