Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq290 140 3e-28
>seq290
Length=58723
Score = 140 bits (154), Expect = 3e-28
Identities = 420/648 (65%), Gaps = 3/648 (0%)
Strand=Plus/Plus
Query 16934 GGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCT 16993
|||| ||| || | ||| |||| || ||||||||||| ||||| ||||| ||
Sbjct 53058 GGTGGATGCTTCAAATGAGAGAACAAGAGGCATGCGAAATCAGTATGTAGACCCTCATCC 53117
Query 16994 CTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAA 17053
|||| ||||| || || || || || | || |||||| |||| ||||| |||||
Sbjct 53118 CTGCAAATAAGCTCATTGGAGAAGGTAAGTCCAGGCATCAAACCTCTCTTCTTCAACCAG 53177
Query 17054 AATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAAT 17113
|| || | ||| ||||| ||||| ||||| | |||||||| || ||||| |||| |||
Sbjct 53178 AAGATAGAGGCAAACGAGCCAGAGAAGAAAACACCCTCGATGGCAGCAAAGGCGACCAAT 53237
Query 17114 CGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGC 17173
| || || ||| || || | || |||||| || |||| || |||| |
Sbjct 53238 CTCTCAGCATACAAAGCATCATCATTGTTTATCCATCTCAAAGCCCATAGAGCCTTTTCC 53297
Query 17174 TTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATT 17233
|| || || || | || || || || || | || |||| |||| |
Sbjct 53298 TTAATAGGTGGAATGGTATGGATAGCATTGAACAAGTAGTCGGACTCCTTCTTGTCGGTG 53357
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| ||||| || | | ||| ||| | || ||||| |||||||| | |||||
Sbjct 53358 ATGTACGTTTCAAGTAAAAGGGAGTAGGTCTCAGAGTGGATGTTCTCAACCATAATCTGG 53417
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|| ||||||||| || ||||| | || |||||| | | ||| || || |
Sbjct 53418 AAACCGTAAAAGGCTCTTGCTTCTGGTAATTGAACCTGCTTCATGAAATTTTGTGCCAAG 53477
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413
|| |||| || || || || ||||| ||||| ||||| | | || || || |||
Sbjct 53478 TTCTCGTCAACAATACCATCAGAAGCGGCAAAAAATGCCAAAACACGCGATATAAAGTAT 53537
Query 17414 TTTTCGTCCGGTGTAA---GAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCT 17470
| |||| | | | | |||||| | || || || || | ||| | ||
Sbjct 53538 CTCTCGTTGGCATTCATCTTGTTGTTCCAGTCAGTCAAGTCCTTAGAGAGATCAATCTCC 53597
Query 17471 TCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGT 17530
|| | ||||||||| ||| | ||||| |||||||| | ||| ||||||| ||| ||
Sbjct 53598 TCAGCAGTCCAAAAAGAGGCCTCCGCCTTCTTATACATTTGCCATATATCATCGTACTGA 53657
Query 17531 ATGGGGAATACAACATATCTATCTAAGGATTCCTTTAACACGGGCTCG 17578
|| ||||| | ||| |||| | || | ||||| | || ||||||
Sbjct 53658 ATAGGGAACATCACAAATCTGTGTATGTTCTCCTTAAGCAAAGGCTCG 53705
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517539273005040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |