Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq15 105 5e-18 >seq15 Length=27206 Score = 105 bits (116), Expect = 5e-18 Identities = 412/639 (64%), Gaps = 18/639 (3%) Strand=Plus/Plus Query 101643 TTGGAAACGGTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACA- 101701 ||||||| ||||| || ||| | | ||| || | || || | ||||| |||| Sbjct 9188 TTGGAAATGGTCTTGGCTTTCTTGCAAGTTGCGACTTGATTGCTTCGACGTGAT-TACAA 9246 Query 101702 TAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGA 101761 || ||||| | |||||| ||| ||| | ||| || || || | | || | || Sbjct 9247 TAAATGTGCGAATCTCCCATAACATGAACAAATTCGCCCGGTTCCATATCACAAACCATT 9306 Query 101762 GCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATA 101821 |||||||| | || | | || ||| ||| || |||||||| || || | || | | Sbjct 9307 GCAATCATATATGTGAGTAAAGCATACGAAGCTATATTAAATGGAACACCAAGACCAACA 9366 Query 101822 TCAGCTGATCTTTGATACAGTTGACAGGAAA------GCTTTCCA--TC----ACAGACA 101869 || ||||| ||||||| ||||| | |||||||| || || || Sbjct 9367 TCGCACGATCTCTGATACATCTGACAACTCAACCTTGGCTTTCCAGTTCTGAAACTCACG 9426 Query 101870 TAAAATTGACTTAATACATGACAAGGCGGCAACACCAT-TTTAGGAATGTCTGAAACATT 101928 || || || | | ||||| ||||| || || |||| ||| ||| | | || ||| Sbjct 9427 TAGAACTGGCACATGACATGGCAAGGTGGTAATGCCATCTTTTTGAAGGCCGGAGG-ATT 9485 Query 101929 CCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTG 101988 ||| || | | | || |||| ||| ||| |||||||||| || | || | || Sbjct 9486 CCATGCTGAAAGAATTATTCTTCGATCATAAGGATTTGTTTTTAATGTGTGGATAATGTG 9545 Query 101989 TTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACAC-CTTTATATTCTGCTC 102047 | |||||| |||| || ||||||| || ||| | || |||||||| | Sbjct 9546 CGCAATCTGGTCATAGCCTTTACCAGTATAATC-CGTGTCACAGTCCTTGTATTCTGCCC 9604 Query 102048 CGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAA 102107 | ||||||||||| ||||||||||| | ||||| ||||| ||||| |||||| || Sbjct 9605 CAAAATGCCTCCATTGAAATCCATATATTGGTCCTAGATCATCTTCACGTCTGTCTGTAA 9664 Query 102108 AACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTG 102167 |||| ||||| | ||| || ||||| | ||||| || || ||| Sbjct 9665 GTCCAATCGAGTCTAAGTACTCTCTTGAACCATTTCCTTCCCAGATATGAACGTTTTTCT 9724 Query 102168 CTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACAC 102227 |||| || |||| | ||| ||| |||| || |||||||| ||||| | | || | Sbjct 9725 CTGAAAGAACTTTACCGTCTGTACTTCCTGAAATGAACCACAAGAGTTCGTGCAAAATGC 9784 Query 102228 CTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAATT 102266 | | | | || ||||| || ||||| || ||||||| Sbjct 9785 CCTTGAAGTAAACCCTCTTCGTCGTTAACAGCGGAAATT 9823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361246894111478