Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq15 105 5e-18
>seq15
Length=27206
Score = 105 bits (116), Expect = 5e-18
Identities = 412/639 (64%), Gaps = 18/639 (3%)
Strand=Plus/Plus
Query 101643 TTGGAAACGGTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACA- 101701
||||||| ||||| || ||| | | ||| || | || || | ||||| ||||
Sbjct 9188 TTGGAAATGGTCTTGGCTTTCTTGCAAGTTGCGACTTGATTGCTTCGACGTGAT-TACAA 9246
Query 101702 TAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGA 101761
|| ||||| | |||||| ||| ||| | ||| || || || | | || | ||
Sbjct 9247 TAAATGTGCGAATCTCCCATAACATGAACAAATTCGCCCGGTTCCATATCACAAACCATT 9306
Query 101762 GCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATA 101821
|||||||| | || | | || ||| ||| || |||||||| || || | || | |
Sbjct 9307 GCAATCATATATGTGAGTAAAGCATACGAAGCTATATTAAATGGAACACCAAGACCAACA 9366
Query 101822 TCAGCTGATCTTTGATACAGTTGACAGGAAA------GCTTTCCA--TC----ACAGACA 101869
|| ||||| ||||||| ||||| | |||||||| || || ||
Sbjct 9367 TCGCACGATCTCTGATACATCTGACAACTCAACCTTGGCTTTCCAGTTCTGAAACTCACG 9426
Query 101870 TAAAATTGACTTAATACATGACAAGGCGGCAACACCAT-TTTAGGAATGTCTGAAACATT 101928
|| || || | | ||||| ||||| || || |||| ||| ||| | | || |||
Sbjct 9427 TAGAACTGGCACATGACATGGCAAGGTGGTAATGCCATCTTTTTGAAGGCCGGAGG-ATT 9485
Query 101929 CCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTG 101988
||| || | | | || |||| ||| ||| |||||||||| || | || | ||
Sbjct 9486 CCATGCTGAAAGAATTATTCTTCGATCATAAGGATTTGTTTTTAATGTGTGGATAATGTG 9545
Query 101989 TTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACAC-CTTTATATTCTGCTC 102047
| |||||| |||| || ||||||| || ||| | || |||||||| |
Sbjct 9546 CGCAATCTGGTCATAGCCTTTACCAGTATAATC-CGTGTCACAGTCCTTGTATTCTGCCC 9604
Query 102048 CGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAA 102107
| ||||||||||| ||||||||||| | ||||| ||||| ||||| |||||| ||
Sbjct 9605 CAAAATGCCTCCATTGAAATCCATATATTGGTCCTAGATCATCTTCACGTCTGTCTGTAA 9664
Query 102108 AACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTG 102167
|||| ||||| | ||| || ||||| | ||||| || || |||
Sbjct 9665 GTCCAATCGAGTCTAAGTACTCTCTTGAACCATTTCCTTCCCAGATATGAACGTTTTTCT 9724
Query 102168 CTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACAC 102227
|||| || |||| | ||| ||| |||| || |||||||| ||||| | | || |
Sbjct 9725 CTGAAAGAACTTTACCGTCTGTACTTCCTGAAATGAACCACAAGAGTTCGTGCAAAATGC 9784
Query 102228 CTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAATT 102266
| | | | || ||||| || ||||| || |||||||
Sbjct 9785 CCTTGAAGTAAACCCTCTTCGTCGTTAACAGCGGAAATT 9823
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361246894111478
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |