Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq14 237 2e-57
seq290 212 7e-50
>seq14
Length=27313
Score = 237 bits (262), Expect = 2e-57
Identities = 1312/2070 (63%), Gaps = 53/2070 (3%)
Strand=Plus/Plus
Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867
|||||||| |||| | | |||| | ||||| | |||||||| || || || | |
Sbjct 16365 GTGAATTGGATGGCACGAGCAGCGGCCTGTGTACGCAAGTAGTACATACCTGTCTTCAAA 16424
Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGA-ATAACTCG-GATCTGCTA 52925
|| |||| |||||||| ||||| || | || ||| | | ||| ||| |
Sbjct 16425 CCCTTCTTCCAGCCGTAAAAGTGCATGGACGTCAACTTACCCATAGTTGGCGAT-TGCAA 16483
Query 52926 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 52985
||||| ||||| |||||| || ||| |||| || ||||| |||||||| | |
Sbjct 16484 G-TGGATGTTCATGGATTGAGACTGGCAAATGTAGGCACCTCTGTCGGCAGCCATGTCGA 16542
Query 52986 TGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 53045
||| | || || | || |||||||| ||| | || | | |||||| | |||||||
Sbjct 16543 TGACAGATTTCTGAGAAAGTTCCCAAACAGTCCTGTACAATTTCTTAATGTTGTCTGGAA 16602
Query 53046 GGTTTG-TA--TTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCAT 53102
|| | || |||||||| |||||| || || || |||||| || |||| |
Sbjct 16603 TATTAGGTAAGTTCTGAATGGATCCATTGTCATGAATGATGAAATTCTTCATTGCATCGT 16662
Query 53103 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTC 53162
|||||| | | || | | | || || | | ||||| || | || || || |
Sbjct 16663 TCCATATTCCCATATCAATAAGGTCCCTTAGCATGTAAGGATTGACAATCTGGAACTCAC 16722
Query 53163 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTC 53222
||| | ||||| | || || ||| ||| | || || | |||| || | |
Sbjct 16723 CAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGGCTCAAAGCACTCGTTGTAAC 16782
Query 53223 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 53282
||| ||| |||| || || ||||| |||||||| || ||||| | |||||||||||
Sbjct 16783 CCATAATCTGAGAGGTAGAGGCAGTTGGCATAGGAGCGACCAAAAGCGAATTTCTAAGAC 16842
Query 53283 CGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNN 53342
| | | ||| || | || | || ||||||| ||| ||||| | || | |
Sbjct 16843 CATCCTTAGCGATCTTGGCCTTCAAAGTCTCCCAATCCCACAGATCAGTTGG--CTTCTT 16900
Query 53343 NNNNNNNNNNNNNT--TGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTA 53400
| || |||||||| || || || ||| | || || |||||
Sbjct 16901 ATTCCACATATCGTACTGGAGAATACCCTTGGAAGCTGGAGAGCCTTCGTAGGTCTCGTA 16960
Query 53401 TGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTC 53460
| || || | | ||| || | | |||| | ||||| | || | ||| ||
Sbjct 16961 CGTACCCTCTTCCACAGAAAGCTGATTTGATTCCTCCAGAGCACCATGGTACAAGGTCTC 17020
Query 53461 GAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAG-AGAA 53519
||| |||| | || || || | ||||| ||| |||||||| ||| | || | |
Sbjct 17021 GAATATCTGTATGTTAAGCTCACGAGCTTCTGGGCAGTCAAATGGC-AATCTGAGCATGA 17079
Query 53520 TAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGA 53579
|||| || || | ||||||||||||| | |||||||||| | |||| | || |||
Sbjct 17080 AGAACGTATCCGCAAGACCTTGAACACCAAGAGCGATAGGTCTGTTTCTCATGTTGGAGT 17139
Query 53580 TTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTC---TGA 53636
| || ||||||| || || ||||| | || || | || | ||| | |||
Sbjct 17140 TGCGGGCCTCTGGAACTGGGTAGTAATTCCTGTCAATGACACGGTTCAAGTTACGTGTGA 17199
Query 53637 CAA------TTACTTTGACCACATCCTTCAGTTTGAGAAAATCAA-ATTG-TCCATCTAT 53688
||| | | ||| || | || | |||| | ||| | || ||| | |
Sbjct 17200 CAACCTTGGTGATCTTGTGCAACTTCTCAAAGTTGA----ACCAACAGTGATCCTTGTCG 17255
Query 53689 TACA-AACATGTTCA---ATGCAATAGAT-GCCAGATTACAAACGGCTACCTCATTAGCA 53743
|| |||| | || | |||| | | |||| ||||| || | ||||||| | |
Sbjct 17256 GACTCAACAAATGCAGGCAAGCAAATGTTTGCCAAGTTACACACACCGACCTCATCTGGA 17315
Query 53744 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGT 53803
| || | | | |||| ||| | ||| | ||||||||||||| || || | |
Sbjct 17316 GAAGAGTACTCGACAACCTCACAGCACAAATTCGAAGACTTGATGGTTCCCAAGTTCTTT 17375
Query 53804 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATC 53863
|||||||||||| |||| || |||||||| |||| ||||| |||||||| ||||| ||
Sbjct 17376 TGATTACTCTTTCTGTTGCAGGCATCCTTGTAAATCATGAAAGGCGTACCGGTTTCTGTC 17435
Query 53864 TGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGAT-TTGTATCTCTT 53922
|| | || | |||| | ||| | ||||||| | | | || | ||
Sbjct 17436 TGAGCCTCCAAAATCTGATACCACAACTTCTGAGCCTTAACGGTTCTTCTTCCACGTCCC 17495
Query 53923 TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCC 53982
| || | ||||| | || ||||| |||||||||||| || |||||| | ||
Sbjct 17496 TCCT-TCTCGTAACGAGTGTACAACTTTTCAAACTCGTCACCATAAACATCTGAAAGACC 17554
Query 53983 AGGACATTCATCCGGACACATCAACGACCAC-TCTCCGTCATCCTTCA-CTCGTTTCATA 54040
|| ||| ||| | | ||| | ||| | || | | |||| | || |||||
Sbjct 17555 TGGGGCCTCAGAAGGAGAAAACAAAGTCCATGTATCATT--TTGTTCAACACGCTTCATG 17612
Query 54041 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 54100
|| |||||||| |||||||||||| || | ||| | | | ||||| || ||
Sbjct 17613 AATAGATCAGGGATCCAAAGAGCTGGGAACAAATCACGTGCACGGATCTCCTCCTTACCG 17672
Query 54101 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 54160
|||||| | | ||||| ||| | | ||||| | |||||| ||||| ||||| ||
Sbjct 17673 TGATTCTTCCTGATATCGATGAAGTCAAAGATATCTGCATGCCAAGGTTCTAAGTAGATA 17732
Query 54161 GTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 54220
| || | || || | ||||| || || || || | || ||||| || | || |
Sbjct 17733 GCAATGGCACCTGGTCTCTTGTTACCACCTTGGTCAACATACCTAGCAGTACTGTTGAAC 17792
Query 54221 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 54280
|| | | ||| ||||||||||||||||||| ||| ||||| || | || || ||
Sbjct 17793 ACACGAACCATAGGAATAATACCATTGGATGTACCGTTGGTACCAGCAATGTATGAACCT 17852
Query 54281 CTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCG 54340
| | |||||| ||| ||| |||||| || || || ||| | || || || || ||
Sbjct 17853 GTAGAACGAATGTTATGAATATGTAGACCAATACCACCAGCCGTCTTGGAAATCAAGGCA 17912
Query 54341 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 54400
|| |||| || || || ||||| || || ||| |||||| |||| || || ||
Sbjct 17913 CACTGTTTCAAAGTGTCGTAGATACCTTCAATAGAGTCATCCTTCATTGCAACTAAGAAG 17972
Query 54401 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 54460
|| ||||| || | || ||| || |||||||| || || ||||| ||||| ||
Sbjct 17973 CAAGACGACATCTGTGGGCGTGGAGTACCGGCATTAAACAATGTTGGAGAGGCGTGTGTG 18032
Query 54461 AACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATC-CCATTGATG 54519
|| || | | || | | || |||| ||| | | || ||||| || | ||
Sbjct 18033 AAGTATCTCTTCGACATCAAATCATACGACTCCAAAACTTTAGGAATATCATCACCG-TG 18091
Query 54520 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 54579
|||||| || || || | ||| | | |||||||| || || | | ||| |||||
Sbjct 18092 AATTCCAACGGCAACTCTCATAAGAAGATGCTGAGGCCTCTCTGCAACCTTACCATTTAT 18151
Query 54580 TTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCT 54637
||| || || || || | || ||||| ||||| ||||| || ||||| ||
Sbjct 18152 CCTCAACAGATATGAACGCTCTAGGGTCTTAAAGCCAAAGTAGTTATAGCTGAAA--TCA 18209
Query 54638 CGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTA 54697
|| || || |||| | ||||| | | |||||| | || | || ||| | |||
Sbjct 18210 CGGTCATAGTTAATGGCCGAGTTCAACTCATCCTTGTGCTTCATGAC--AATC--TTGTA 18265
Query 54698 A--TACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAA 54753
| | ||| || || || || || | ||| |||| || || |||||| | |
Sbjct 18266 AACTTCTTCAGAGATCATAGGGGATTTCTTCTGGGTTTTTGGGTTATAATAGTTGTAAAG 18325
Query 54754 ATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTAT 54813
||| | || || ||| ||| | || || || | ||||| | ||| || | ||| |
Sbjct 18326 ATCTTCAATAACATCAGAGAATGGCTTCTTAGTCTGCTTGTGCAAATTAGAAATGGCAAG 18385
Query 54814 TCTAGCGGCTAGAATGGCATAATCCGGATG 54843
||| ||||| | | | |||||||| |||||
Sbjct 18386 TCTGGCGGCCAAAGTAGCATAATCTGGATG 18415
>seq290
Length=58723
Score = 212 bits (234), Expect = 7e-50
Identities = 601/908 (66%), Gaps = 18/908 (2%)
Strand=Plus/Plus
Query 23823 TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTT 23882
|||| | |||||| || || ||||| ||| || | || || || || |||||
Sbjct 52776 TCTTTTGCCATAACACCAGCCTTCTGGTAGTCAGAAACTCTCTTCTCAAAGAAGTTAGTC 52835
Query 23883 TTACCTTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTT 23942
||||| | || || || || ||||| || ||| ||||||||||| |||| || | | |
Sbjct 52836 TTACCAGCCAAGGAAATGTTCTCCATAAAGTCGAATGGATTGGTAGCATTGTAAACTTTC 52895
Query 23943 TTAAATCCCAATTCAGAAATCAATCTATCTGCGACA-AACTCCATATATGTTTTCATCAT 24001
| | ||||||| || || |||||| || || ||| || || | ||| ||||||
Sbjct 52896 TCACATCCCAAAGCAATAAGCAATCTGTCGGC-ACAGAATTCAACATAATGGGCCATCAT 52954
Query 24002 TTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTA-AGAAATTCTTGTTCAA 24060
|| | ||||| || | | |||||| ||||| || | ||||| |||| | |||
Sbjct 52955 ATCGAAGTTCATACCAAGCAAAGAAACTGGGAGAGCATCACTCCAGAAAGTCTTCT-CAA 53013
Query 24061 TAGAGACCGCGTCTGTTATAATAGATCTTACTGTTT-CTTCACTCGGTGGATACAATAAA 24119
|| ||| || || || ||||| ||||| | | | | ||| ||||||| | |||
Sbjct 53014 TATTGACAGCCTCGGTCATAATTT-TCTTAATAATAACCTTACTAGGTGGATGCTTCAAA 53072
Query 24120 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 24179
|| |||| | ||||||||||| ||||||||||| || || | ||| | ||
Sbjct 53073 TGAGAGAACAAGAGGCATGCGAAATCAGTATGTAGACCCTCATCCCTGCAAATAAGCTCA 53132
Query 24180 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 24239
||||| || || ||||| ||||| | || | ||| || | ||| || || || |||||
Sbjct 53133 TTGGAGAAGGTAAGTCCAGGCATCAAACCTCTCTTCTTCAACCAGAAGATAGAGGCAAAC 53192
Query 24240 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCG 24299
|| ||||| ||||||| || || | || |||||||| | | ||| || ||||
Sbjct 53193 GAGCCAGAGAAGAAAACACCCTCGATGGCAGCAAAGGCGACCAATCTCTCAGCATACAAA 53252
Query 24300 GCGCTGTCA---TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 24356
|| ||| | |||||| | |||||| ||||| | || | | || ||
Sbjct 53253 GCATCATCATTGTTTATCCATCTCAAAGCCCATAGAGCCTTTTCCTTAATAGGTGGAATG 53312
Query 24357 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 24416
|| | |||||||| || | |||| || || | || | | || || ||||
Sbjct 53313 GTATGGATAGCATTGAACAAGTAGTCGGACTCCTTCTTGTCGGTGATGTACGTTTCAAGT 53372
Query 24417 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACAT 24476
||||| || | || || || ||||| |||| || || || ||||| || |
Sbjct 53373 AAAAGGGAGTAGGTCTCAGAGTGGATGTTCTCAACCATAATCTGGAAACCGTAAAAGGCT 53432
Query 24477 CTAGCCTC-GGTAATCTGTA-CTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTA 24534
|| || || |||||| || | || || | |||| || ||| || || || | || |
Sbjct 53433 CTTGCTTCTGGTAAT-TGAACCTGCTTCATGAAAT-TTTGTGCCAAGTTCTCGTCAACAA 53490
Query 24535 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTG 24594
| || ||| || |||||||| ||||| ||| | |||||| ||| | |||| |||
Sbjct 53491 TACCATCAGAAGCGGCAAAAAATGCCAAAACACGCGATATAAAGTATCTCTCGT-TGGCA 53549
Query 24595 TTAGT----TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAA 24650
|| | || ||||| ||| | | || ||||| | ||| | || || | ||||||
Sbjct 53550 TTCATCTTGTTGTTCCAGTCAGTCAAGTCCTTAGAGAGATCAATCTCCTCAGCAGTCCAA 53609
Query 24651 AATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATA 24710
|| || ||||| ||||| |||||||| | ||| || |||| || ||||| || || ||
Sbjct 53610 AAAGAGGCCTCCGCCTTCTTATACATTTGCCATATATCATCGTACTGAATAGGGAACATC 53669
Query 24711 ACAAATCT 24718
||||||||
Sbjct 53670 ACAAATCT 53677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593714341753440
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