Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq208 120 2e-22 seq423 91.5 1e-13 >seq208 Length=10633 Score = 120 bits (132), Expect = 2e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 25031 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 25090 |||||||||||| ||| | || || |||||||| || || || ||| || ||| | Sbjct 9682 AAAAATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACTATCACCTTGGAGGTGGAGTC 9623 Query 25091 CGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 25150 |||| || | | | || |||||||||| || ||||| || || | || || Sbjct 9622 TTCAGACACCATTGACAATGTCAAGCAAAAGATCCAGGATAAGGAGGGAATCCCACCTGA 9563 Query 25151 TCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTA 25210 ||| || ||| | |||||||| || || || ||||| ||| || |||| || | || || Sbjct 9562 TCAGCAGAGATTGATCTTTGCCGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCTGACTA 9503 Query 25211 CAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||| || |||||||| || ||||||||| |||| || |||| ||||||| Sbjct 9502 CAACATCCAAAAGGAGTCAACTCTTCACTTGGTCTTGAGATTGAGAGGAGG 9452 >seq423 Length=50725 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 ||||||||||| ||| | || || ||||| || || ||||| ||| || || | Sbjct 3826 AAAATGCAAATTTTCGTTAAGACTTTGACCGGTAAGACCATCACCCTTGAGGTTGAGTCT 3767 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 | || || | | | || |||| ||||| || || || || || | || ||| Sbjct 3766 TCCGACACTATTGACAATGTCAAACAAAAGATCCAAGACAAGGAGGGAATTCCACCTGAT 3707 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 || || ||| | |||||||| || || || ||||| || || |||| || | || ||| Sbjct 3706 CAGCAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGACGGCAGAACTTTGTCTGACTAC 3647 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || ||||| ||||| || ||||||||| |||| || |||| |||| || Sbjct 3646 AACATTCAGAAGGAGTCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 3597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410791903558892