Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq423 91.5 2e-13 seq208 89.7 5e-13 >seq423 Length=50725 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| ||||| || || | || || || ||||||||| | || || || | Sbjct 3826 AAAATGCAAATTTTCGTTAAGACTTTGACCGGTAAGACCATCACCCTTGAGGTTGAGTCT 3767 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 |||||| | | | |||| |||| || | ||||| ||||| || || | || Sbjct 3766 TCCGACACTATTGACAATGTCAAACAAAAGATCCAAGACAAGGAGGGAATTCCACCTGAT 3707 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || | |||| || || || ||| |||| |||| | || | |||||| Sbjct 3706 CAGCAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGACGGCAGAACTTTGTCTGACTAC 3647 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||| ||||||||| |||| || || | || ||| | ||||| || || Sbjct 3646 AACATTCAGAAGGAGTCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 3597 >seq208 Length=10633 Score = 89.7 bits (98), Expect = 5e-13 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 40685 GAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAG 40744 ||||||||||||| ||||| || || | ||||| || || |||||| | || || || Sbjct 9683 GAAAAATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACTATCACCTTGGAGGTGGAGT 9624 Query 40745 CCACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 | | |||| | | | | ||||| |||| || | || || ||||| ||||| | | Sbjct 9623 CTTCAGACACCATTGACAATGTCAAGCAAAAGATCCAGGATAAGGAGGGAATCCCACCTG 9564 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 | ||||| || | |||| || || || ||| |||| || | | || | |||| Sbjct 9563 ATCAGCAGAGATTGATCTTTGCCGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCTGACT 9504 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||| |||||| | || || || | || ||| | ||||| || || Sbjct 9503 ACAACATCCAAAAGGAGTCAACTCTTCACTTGGTCTTGAGATTGAGAGGAGG 9452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515212901445280