Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq15 125 5e-24
>seq15
Length=27206
Score = 125 bits (138), Expect = 5e-24
Identities = 413/636 (65%), Gaps = 16/636 (3%)
Strand=Plus/Plus
Query 97007 TTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACAT 97066
|||| || || || || ||| | ||| ||| ||| || || | |||||| ||
Sbjct 9188 TTGGAAATGGTCTTGGCTTTCTTGCAAGTTGCGACTTGATTGCTTCGACGTGATTACAAT 9247
Query 97067 AAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGG 97126
||||||| | |||||| | | |||| |||||| || || | | |||| || |
Sbjct 9248 AAATGTGCGAATCTCCCATAACATGAACAAATTCGCCCGGTTCCATATCACAAACCATTG 9307
Query 97127 CGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATAT 97186
| |||||| | || | || || ||| ||| || ||||| || || || || || | ||
Sbjct 9308 CAATCATATATGTGAGTAAAGCATACGAAGCTATATTAAATGGAACACCAAGACCAACAT 9367
Query 97187 CAGCTGATCTTTGATATAACTGACAGGAAA------GCTTTCCA--TC----ACACACAT 97234
| ||||| ||||| | |||||| | |||||||| || || ||| |
Sbjct 9368 CGCACGATCTCTGATACATCTGACAACTCAACCTTGGCTTTCCAGTTCTGAAACTCACGT 9427
Query 97235 AAAACTGACTCAATACATGACAGGGGGGCAACGCCAT-TTTTGGAACATCTAAGACATTC 97293
| ||||| | || ||||| || || || || ||||| |||| ||| | || ||||
Sbjct 9428 AGAACTGGCACATGACATGGCAAGGTGGTAATGCCATCTTTTTGAAGGCCGGAGG-ATTC 9486
Query 97294 CAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGC 97353
|| || | | | ||||||| ||| || ||||| | || || | || || |||
Sbjct 9487 CATGCTGAAAGAATTATTCTTCGATCATAAGGATTTGTTTTTAATGTGTGGATAATGTGC 9546
Query 97354 TTTAATTGATCAACGCCTTCTCCACCATAATT-GTGCTTAAGACCTTGATATTCTGCTCC 97412
| || ||| ||||| ||| ||||| ||| || ||||| |||||||| ||
Sbjct 9547 GCAATCTGGTCATAGCCTTTACCAGTATAATCCGTGTCACAGTCCTTG-TATTCTGCCCC 9605
Query 97413 AAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAA 97472
||||||||||||||| |||||||| | ||||| || || |||| ||| || |
Sbjct 9606 AAAATGCCTCCATTGAAATCCATATATTGGTCCTAGATCATCTTCACGTCTGTCTGTAAG 9665
Query 97473 ACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGATGC 97532
|||| | ||||| || || || |||||| | ||||| || || || |
Sbjct 9666 TCCAATCGAGTCTAAGTACTCTCTTGAACCATTTCCTTCCCAGATATGAACGTTTTTCTC 9725
Query 97533 TGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACC 97592
|| ||| |||| | ||| ||| |||| || |||||||| | ||| | || || ||
Sbjct 9726 TGAAAGAACTTTACCGTCTGTACTTCCTGAAATGAACCACAAGAGTTCGTGCAAAATGCC 9785
Query 97593 TCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAA 97628
| | | || ||||| || ||||| || |||||
Sbjct 9786 CTTGAAGTAAACCCTCTTCGTCGTTAACAGCGGAAA 9821
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346779866551460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |