Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq15 125 5e-24 >seq15 Length=27206 Score = 125 bits (138), Expect = 5e-24 Identities = 413/636 (65%), Gaps = 16/636 (3%) Strand=Plus/Plus Query 97007 TTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACAT 97066 |||| || || || || ||| | ||| ||| ||| || || | |||||| || Sbjct 9188 TTGGAAATGGTCTTGGCTTTCTTGCAAGTTGCGACTTGATTGCTTCGACGTGATTACAAT 9247 Query 97067 AAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGG 97126 ||||||| | |||||| | | |||| |||||| || || | | |||| || | Sbjct 9248 AAATGTGCGAATCTCCCATAACATGAACAAATTCGCCCGGTTCCATATCACAAACCATTG 9307 Query 97127 CGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATAT 97186 | |||||| | || | || || ||| ||| || ||||| || || || || || | || Sbjct 9308 CAATCATATATGTGAGTAAAGCATACGAAGCTATATTAAATGGAACACCAAGACCAACAT 9367 Query 97187 CAGCTGATCTTTGATATAACTGACAGGAAA------GCTTTCCA--TC----ACACACAT 97234 | ||||| ||||| | |||||| | |||||||| || || ||| | Sbjct 9368 CGCACGATCTCTGATACATCTGACAACTCAACCTTGGCTTTCCAGTTCTGAAACTCACGT 9427 Query 97235 AAAACTGACTCAATACATGACAGGGGGGCAACGCCAT-TTTTGGAACATCTAAGACATTC 97293 | ||||| | || ||||| || || || || ||||| |||| ||| | || |||| Sbjct 9428 AGAACTGGCACATGACATGGCAAGGTGGTAATGCCATCTTTTTGAAGGCCGGAGG-ATTC 9486 Query 97294 CAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGC 97353 || || | | | ||||||| ||| || ||||| | || || | || || ||| Sbjct 9487 CATGCTGAAAGAATTATTCTTCGATCATAAGGATTTGTTTTTAATGTGTGGATAATGTGC 9546 Query 97354 TTTAATTGATCAACGCCTTCTCCACCATAATT-GTGCTTAAGACCTTGATATTCTGCTCC 97412 | || ||| ||||| ||| ||||| ||| || ||||| |||||||| || Sbjct 9547 GCAATCTGGTCATAGCCTTTACCAGTATAATCCGTGTCACAGTCCTTG-TATTCTGCCCC 9605 Query 97413 AAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAA 97472 ||||||||||||||| |||||||| | ||||| || || |||| ||| || | Sbjct 9606 AAAATGCCTCCATTGAAATCCATATATTGGTCCTAGATCATCTTCACGTCTGTCTGTAAG 9665 Query 97473 ACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGATGC 97532 |||| | ||||| || || || |||||| | ||||| || || || | Sbjct 9666 TCCAATCGAGTCTAAGTACTCTCTTGAACCATTTCCTTCCCAGATATGAACGTTTTTCTC 9725 Query 97533 TGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACC 97592 || ||| |||| | ||| ||| |||| || |||||||| | ||| | || || || Sbjct 9726 TGAAAGAACTTTACCGTCTGTACTTCCTGAAATGAACCACAAGAGTTCGTGCAAAATGCC 9785 Query 97593 TCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAA 97628 | | | || ||||| || ||||| || ||||| Sbjct 9786 CTTGAAGTAAACCCTCTTCGTCGTTAACAGCGGAAA 9821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346779866551460