Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq423 91.5 2e-13
seq208 87.8 3e-12
>seq423
Length=50725
Score = 91.5 bits (100), Expect = 2e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
||||||||| || | ||||| | || || || || || || | ||| |||| |
Sbjct 3824 AATGCAAATTTTCGTTAAGACTTTGACCGGTAAGACCATCACCCTTGAGGTTGAGTCTTC 3765
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| || ||| ||| | ||||| || || ||||| || || || || |||||||||||
Sbjct 3764 CGACACTATTGACAATGTCAAACAAAAGATCCAAGACAAGGAGGGAATTCCACCTGATCA 3705
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|| || | || ||||| || || || || ||||| | |||| || || || ||
Sbjct 3704 GCAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGACGGCAGAACTTTGTCTGACTACAA 3645
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTA 124767
||||| || || || ||| | || |||||||| | || |||||||||
Sbjct 3644 CATTCAGAAGGAGTCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGTA 3595
>seq208
Length=10633
Score = 87.8 bits (96), Expect = 3e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
||||||||| || | ||||| | || || || ||||| || | ||| | || |
Sbjct 9679 AATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACTATCACCTTGGAGGTGGAGTCTTC 9620
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| || ||| ||| | || || || || || ||||| || || || |||||||||||
Sbjct 9619 AGACACCATTGACAATGTCAAGCAAAAGATCCAGGATAAGGAGGGAATCCCACCTGATCA 9560
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|| || | || ||||| || || || || |||||| | |||| || || || ||
Sbjct 9559 GCAGAGATTGATCTTTGCCGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCTGACTACAA 9500
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| ||||| || |||||| | || ||||| || | || |||| |||||
Sbjct 9499 CATCCAAAAGGAGTCAACTCTTCACTTGGTCTTGAGATTGAGAGGAGGTAT 9449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755446764550400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |