Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq423 118 8e-22
seq208 116 3e-21
>seq423
Length=50725
Score = 118 bits (130), Expect = 8e-22
Identities = 167/233 (72%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||||||| || |||||||| || ||| ||||||||||||||||||||| |
Sbjct 3597 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGAC 3656
Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
|||| | |||| |||| || || || || || ||||| | ||| || || || |
Sbjct 3657 AAAGTT--CTGCCGTCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTG 3714
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | ||||||||||| || ||||| || || | | |||| | ||| |
Sbjct 3715 GAATTCCCTCCTTGTCTTGGATCTTTTGTTTGACATTGTCAATAGTGTCGGAAGACTCAA 3774
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
|||| | ||| || ||||| || |||| |||||| || || |||||||| |||
Sbjct 3775 CCTCAAGGGTGATGGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCATTTTG 3827
>seq208
Length=10633
Score = 116 bits (128), Expect = 3e-21
Identities = 166/232 (72%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|| ||||||||||| || |||||||| || || |||||| || ||||||||||| |
Sbjct 9452 CCTCCTCTCAATCTCAAGACCAAGTGAAGAGTTGACTCCTTTTGGATGTTGTAGTCAGAC 9511
Query 45170 A--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
| ||| | | || |||| || || ||||| || ||||| | ||| || || || |
Sbjct 9512 AAAGTT--CTGCCATCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGTG 9569
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | |||||||| ||| || |||||||| || | | | |||| | |||||
Sbjct 9570 GGATTCCCTCCTTATCCTGGATCTTTTGCTTGACATTGTCAATGGTGTCTGAAGACTCCA 9629
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339
|||||| ||| || ||||| ||||||| ||||| || || |||||||| ||
Sbjct 9630 CCTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTT 9681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395070490950538
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |