Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq423 105 5e-18
seq208 105 5e-18
>seq423
Length=50725
Score = 105 bits (116), Expect = 5e-18
Identities = 170/243 (70%), Gaps = 1/243 (0%)
Strand=Plus/Plus
Query 18086 TTCTTTTTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAAT 18145
||||| || ||| || || | | ||| | |||| |||||| || || || || |||||
Sbjct 3585 TTCTTCTTCTTA-CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGAAT 3643
Query 18146 GTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTG 18205
||||||||| | || ||| | | || ||||| || || || ||| |||| | ||| ||
Sbjct 3644 GTTGTAGTCAGACAAAGTTCTGCCGTCCTCCAACTGCTTACCAGCAAAGATCAATCTCTG 3703
Query 18206 TTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTC 18265
||||| || | || ||||| || || | ||| ||||| | ||| ||||||
Sbjct 3704 CTGATCAGGTGGAATTCCCTCCTTGTCTTGGATCTTTTGTTTGACATTGTCAATAGTGTC 3763
Query 18266 ACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
| ||| |||| ||||||| | || |||||||| || || || |||||||||||
Sbjct 3764 GGAAGACTCAACCTCAAGGGTGATGGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCAT 3823
Query 18326 TTT 18328
|||
Sbjct 3824 TTT 3826
>seq208
Length=10633
Score = 105 bits (116), Expect = 5e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
||||| | | ||| | |||| |||||| ||||| || ||||| ||||||||||| | |
Sbjct 9452 CCTCCTCTCAATCTCAAGACCAAGTGAAGAGTTGACTCCTTTTGGATGTTGTAGTCAGAC 9511
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| ||| | | ||| ||||| || || || ||| |||| | ||| || ||||| ||
Sbjct 9512 AAAGTTCTGCCATCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGTGGG 9571
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278
| || |||||||| || | ||||||||| | ||| ||||| | |||
Sbjct 9572 ATTCCCTCCTTATCCTGGATCTTTTGCTTGACATTGTCAATGGTGTCTGAAGACTCCACC 9631
Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTT 18329
|| | |||||| | || || ||||| || || || |||||||||||||||
Sbjct 9632 TCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTTT 9682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379339478456610
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |