Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq290 98.7 2e-15
>seq290
Length=58723
Score = 98.7 bits (108), Expect = 2e-15
Identities = 287/435 (66%), Gaps = 23/435 (5%)
Strand=Plus/Minus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|| ||||||||||| | || || | ||||| ||| | || || || || ||||||
Sbjct 53233 GTCGCCTTTGCTGCCATCGAGGGTGTTTTCTTCTCTGGCTCGTTTGCCTCTATCTTCTGG 53174
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| ||||| || ||| | ||||||| || |||| |||||||||| | |||| |||||
Sbjct 53173 TTGAAGAAGAGAGGTTTGATGCCTGGACTTACCTTCTCCAATGAGCTTATTTGCAGGGAT 53114
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
|| ||||| ||| || || |||||| | |||| | |||| | || |
Sbjct 53113 GAGGGTCTACATACTGATTTCGCATGCCTCTTGTTCTCTCA----TTTGAAGCATCCACC 53058
Query 102098 TCAAGAGAAAGG--ATTCTT---GAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAAT 102152
| || |||| ||| || ||||| | || || || ||| |||| | |||| |
Sbjct 53057 T----AGTAAGGTTATTATTAAGAAAATTATGACCGAGGCTGTCAATATTG-AGAAGACT 53003
Query 102153 TTCT-CACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAG 102211
|||| | | | | || || ||| || | || ||||||| | | ||||| |||
Sbjct 53002 TTCTGGAGTGATGCTCTCCCAGTTTCTTTGCTTGGTATGAACTTCGATATGATGGCCCAT 52943
Query 102212 TACATTGAATT-TGT---GGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTA 102267
|| ||||||| ||| | ||||| ||||| || ||||| || || ||
Sbjct 52942 TATGTTGAATTCTGTGCCGACAGATTGCTTATTGCTT----TGGGATGTGAGAAAGTTTA 52887
Query 102268 TAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTT 102327
|||| |||||| || ||| || ||||| || |||||| | | |||||| |||||
Sbjct 52886 CAATGCTACCAATCCATTCGACTTTATGGAGAACATTTCCTTGGCTGGTAAGACTAACTT 52827
Query 102328 TTTTGAAAAGAGAGT 102342
||||| ||||||||
Sbjct 52826 CTTTGAGAAGAGAGT 52812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989571599893990
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |