Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq290 98.7 2e-15 >seq290 Length=58723 Score = 98.7 bits (108), Expect = 2e-15 Identities = 287/435 (66%), Gaps = 23/435 (5%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || ||||||||||| | || || | ||||| ||| | || || || || |||||| Sbjct 53233 GTCGCCTTTGCTGCCATCGAGGGTGTTTTCTTCTCTGGCTCGTTTGCCTCTATCTTCTGG 53174 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | ||||| || ||| | ||||||| || |||| |||||||||| | |||| ||||| Sbjct 53173 TTGAAGAAGAGAGGTTTGATGCCTGGACTTACCTTCTCCAATGAGCTTATTTGCAGGGAT 53114 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 || ||||| ||| || || |||||| | |||| | |||| | || | Sbjct 53113 GAGGGTCTACATACTGATTTCGCATGCCTCTTGTTCTCTCA----TTTGAAGCATCCACC 53058 Query 102098 TCAAGAGAAAGG--ATTCTT---GAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAAT 102152 | || |||| ||| || ||||| | || || || ||| |||| | |||| | Sbjct 53057 T----AGTAAGGTTATTATTAAGAAAATTATGACCGAGGCTGTCAATATTG-AGAAGACT 53003 Query 102153 TTCT-CACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAG 102211 |||| | | | | || || ||| || | || ||||||| | | ||||| ||| Sbjct 53002 TTCTGGAGTGATGCTCTCCCAGTTTCTTTGCTTGGTATGAACTTCGATATGATGGCCCAT 52943 Query 102212 TACATTGAATT-TGT---GGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTA 102267 || ||||||| ||| | ||||| ||||| || ||||| || || || Sbjct 52942 TATGTTGAATTCTGTGCCGACAGATTGCTTATTGCTT----TGGGATGTGAGAAAGTTTA 52887 Query 102268 TAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTT 102327 |||| |||||| || ||| || ||||| || |||||| | | |||||| ||||| Sbjct 52886 CAATGCTACCAATCCATTCGACTTTATGGAGAACATTTCCTTGGCTGGTAAGACTAACTT 52827 Query 102328 TTTTGAAAAGAGAGT 102342 ||||| |||||||| Sbjct 52826 CTTTGAGAAGAGAGT 52812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989571599893990