Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq14 295 8e-75
seq290 196 6e-45
>seq14
Length=27313
Score = 295 bits (326), Expect = 8e-75
Identities = 1324/2067 (64%), Gaps = 47/2067 (2%)
Strand=Plus/Plus
Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105
|||||||| |||| | | |||| | ||||| | |||||||| || || || | |
Sbjct 16365 GTGAATTGGATGGCACGAGCAGCGGCCTGTGTACGCAAGTAGTACATACCTGTCTTCAAA 16424
Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCG-GATCTGCTA 62163
|| |||| |||||||| ||||| ||| | || ||| | | ||| ||| |
Sbjct 16425 CCCTTCTTCCAGCCGTAAAAGTGCATGGACGTCAACTTACCCATAGTTGGCGAT-TGCAA 16483
Query 62164 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 62223
||||| ||||| |||||| || ||| |||| || ||||| |||||||| | |
Sbjct 16484 G-TGGATGTTCATGGATTGAGACTGGCAAATGTAGGCACCTCTGTCGGCAGCCATGTCGA 16542
Query 62224 TGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62283
||| | || || | || |||||||| ||| | || | | |||||| | |||||||
Sbjct 16543 TGACAGATTTCTGAGAAAGTTCCCAAACAGTCCTGTACAATTTCTTAATGTTGTCTGGAA 16602
Query 62284 GGTTTG-TA--TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCAT 62340
|| | || ||||||||||||||| || || || |||||| || |||| |
Sbjct 16603 TATTAGGTAAGTTCTGAATGGATCCATTGTCATGAATGATGAAATTCTTCATTGCATCGT 16662
Query 62341 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTC 62400
|||||| | | || | | | || || | | || || || | ||||| || |
Sbjct 16663 TCCATATTCCCATATCAATAAGGTCCCTTAGCATGTAAGGATTGACAATCTGGAACTCAC 16722
Query 62401 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTC 62460
||| | ||||| | || || ||| ||| | || || | |||| || | |
Sbjct 16723 CAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGGCTCAAAGCACTCGTTGTAAC 16782
Query 62461 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 62520
||| ||| |||| || || ||||| |||||||| || ||||| | |||||||||||
Sbjct 16783 CCATAATCTGAGAGGTAGAGGCAGTTGGCATAGGAGCGACCAAAAGCGAATTTCTAAGAC 16842
Query 62521 CGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAACAN 62580
| | | ||| || | || | | ||||||| ||| ||||| | || |
Sbjct 16843 CATCCTTAGCGATCTTGGCCTTCAAAGTCTCCCAATCCCACAGATCAGTTGGCTTCTTAT 16902
Query 62581 NNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCATATG 62640
|| || |||||||| || || || ||| | || || || || |
Sbjct 16903 TCCACATATCGTACTGGAGAATACCCTTGGAAGCTGGAGAGCCTTCGTAGGTCTCGTACG 16962
Query 62641 GTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAA 62700
|| || | | ||| || | | |||| | ||||| | || | ||| || |
Sbjct 16963 TACCCTCTTCCACAGAAAGCTGATTTGATTCCTCCAGAGCACCATGGTACAAGGTCTCGA 17022
Query 62701 AGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAG-AGAATA 62759
| |||| | || || || | ||||| |||| |||||||| ||| | || | |
Sbjct 17023 ATATCTGTATGTTAAGCTCACGAGCTTCTGGGCAGTCAAATGGC-AATCTGAGCATGAAG 17081
Query 62760 AACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATT 62819
|||| ||||| | ||||||||||||| | |||||||||| | |||| | || ||| |
Sbjct 17082 AACGTATCCGCAAGACCTTGAACACCAAGAGCGATAGGTCTGTTTCTCATGTTGGAGTTG 17141
Query 62820 TCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TGACA 62876
|| ||||||| || || ||||| | || || | || | || | |||||
Sbjct 17142 CGGGCCTCTGGAACTGGGTAGTAATTCCTGTCAATGACACGGTTCAAGTTACGTGTGACA 17201
Query 62877 A------TTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTATTACA 62930
| | | ||| || | || | |||| || | | || | | ||
Sbjct 17202 ACCTTGGTGATCTTGTGCAACTTCTCAAAGTTGAACCAAC--AGTGATCCTTGTCGGACT 17259
Query 62931 -AACATGTTCA---ATGCAACAGAT-GCCAGATTACACACGGCTACCTCATTAGCATCCG 62985
|||| | || | |||| | | |||| |||||||| | ||||||| | | |
Sbjct 17260 CAACAAATGCAGGCAAGCAAATGTTTGCCAAGTTACACACACCGACCTCATCTGGAGAAG 17319
Query 62986 CATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGAT 63045
|| | | | |||| ||| | ||| | ||||||| ||||| || || | |||||
Sbjct 17320 AGTACTCGACAACCTCACAGCACAAATTCGAAGACTTGATGGTTCCCAAGTTCTTTTGAT 17379
Query 63046 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAG 63105
|||||||| |||| || |||||||| |||| ||||| || ||||| ||||| ||||||
Sbjct 17380 TACTCTTTCTGTTGCAGGCATCCTTGTAAATCATGAAAGGCGTACCGGTTTCTGTCTGAG 17439
Query 63106 ATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGAT-TTGTATCTCCTTTC 63163
|| | |||| | ||| | | || ||||||| | | | || | ||| | |
Sbjct 17440 CCTCCAAAATCTGATACCACAACTTCT-GAGCCTTAACGGTTCTTCTTCCACGTCCCTCC 17498
Query 63164 TCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACAT-TGTCCAATCTAG 63222
| | ||||| |||| ||||| ||| |||||||| || |||||| || | || |
Sbjct 17499 T-TCTCGTAACGAGTGTACAACTTTTCAAACTCGTCACCATAAACATCTGAAAGACCTGG 17557
Query 63223 GACATTCATCCGGACACATCAACGACCAC-TCTCCGTCATCCTTCA-CTCGTTTCATAAA 63280
| | | || ||| | | ||| | ||| | || | | |||| | || ||||| ||
Sbjct 17558 GGCCT-CAGAAGGAGAAAACAAAGTCCATGTATCATT--TTGTTCAACACGCTTCATGAA 17614
Query 63281 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGT 63340
|||||||| |||||||||||| || | ||| | || | ||||| || ||
Sbjct 17615 TAGATCAGGGATCCAAAGAGCTGGGAACAAATCACGTGCACGGATCTCCTCCTTACCGTG 17674
Query 63341 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63400
|||||| | | ||||| ||| | | ||||| | |||||| ||||| ||||| || ||
Sbjct 17675 ATTCTTCCTGATATCGATGAAGTCAAAGATATCTGCATGCCAAGGTTCTAAGTAGATAGC 17734
Query 63401 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 63460
|| | || || | ||||| || || || || | || ||||| || | || | ||
Sbjct 17735 AATGGCACCTGGTCTCTTGTTACCACCTTGGTCAACATACCTAGCAGTACTGTTGAACAC 17794
Query 63461 TCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACT 63520
| | ||| ||||||||||| || ||| |||| |||||||| | || || || |
Sbjct 17795 ACGAACCATAGGAATAATACCATTGGATGTACCGTTGGTACCAGCAATGTATGAACCTGT 17854
Query 63521 GGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 63580
| |||||| ||| ||| |||||| || || || ||| | || || || || || ||
Sbjct 17855 AGAACGAATGTTATGAATATGTAGACCAATACCACCAGCCGTCTTGGAAATCAAGGCACA 17914
Query 63581 TCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACA 63640
|||| || ||||| ||||| ||||| || ||||| |||| || || || ||
Sbjct 17915 CTGTTTCAAAGTGTCGTAGATACCTTCAATAGAGTCATCCTTCATTGCAACTAAGAAGCA 17974
Query 63641 GCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 63700
||||| || | || | ||| || |||||||| || || ||||| ||||| || ||
Sbjct 17975 AGACGACATCTGTGGGCGTGGAGTACCGGCATTAAACAATGTTGGAGAGGCGTGTGTGAA 18034
Query 63701 CCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAA 63759
|| | | || | | || |||| ||| | | || ||||| || | ||||
Sbjct 18035 GTATCTCTTCGACATCAAATCATACGACTCCAAAACTTTAGGAATATCATCACCG-TGAA 18093
Query 63760 TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTT 63819
|||| || || || | ||| | | |||||||| || || ||| || |||||
Sbjct 18094 TTCCAACGGCAACTCTCATAAGAAGATGCTGAGGCCTCTCTGCAACCTTACCATTTATCC 18153
Query 63820 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCG 63877
|||||| || || || | || ||||| ||||| ||||| || ||||| || ||
Sbjct 18154 TCAACAGATATGAACGCTCTAGGGTCTTAAAGCCAAAGTAGTTATAGCTGAAA--TCACG 18211
Query 63878 TTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAA- 63936
|| || |||| |||| || | || |||||| | || | || || | || ||
Sbjct 18212 GTCATAGTTAATGGCCGAGTTCAACTCATCCTTGTGCTTCATGACAAT---CTTGTAAAC 18268
Query 63937 TACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATC 63994
| ||| || || || || || | ||| |||| || ||| ||||||| | | |||
Sbjct 18269 TTCTTCAGAGATCATAGGGGATTTCTTCTGGGTTTTTGGGTTATAATAGTTGTAAAGATC 18328
Query 63995 CTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCT 64054
|| || || ||| ||| | || || || | |||||| | ||| || ||||| | |||
Sbjct 18329 TTCAATAACATCAGAGAATGGCTTCTTAGTCTGCTTGTGCAAATTAGAAATGGCAAGTCT 18388
Query 64055 GGCGGCTAGAATGGCATAATCCGGATG 64081
|||||| | | | |||||||| |||||
Sbjct 18389 GGCGGCCAAAGTAGCATAATCTGGATG 18415
>seq290
Length=58723
Score = 196 bits (216), Expect = 6e-45
Identities = 593/906 (65%), Gaps = 14/906 (2%)
Strand=Plus/Plus
Query 33270 TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTT 33329
|||| | |||||| || || ||||| ||| || | || || || || |||||
Sbjct 52776 TCTTTTGCCATAACACCAGCCTTCTGGTAGTCAGAAACTCTCTTCTCAAAGAAGTTAGTC 52835
Query 33330 TTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAttttt 33389
|| || |||| || || || ||||| || || || ||||||||| ||||||||| |||
Sbjct 52836 TTACCAGCCAAGGAAATGTTCTCCATAAAGTCGAATGGATTGGTAGCATTGTAAACTTTC 52895
Query 33390 ttAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATT 33449
| | ||||||| || || |||||| || || |||||| | ||| ||||||
Sbjct 52896 TCACATCCCAAAGCAATAAGCAATCTGTCGGCACAGAATTCAACATAATGGGCCATCATA 52955
Query 33450 TCACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTA-AGAAATTCTTGTTCAAT 33508
|| | ||||| || | | |||||| ||||| || | ||||| |||| | ||||
Sbjct 52956 TCGAAGTTCATACCAAGCAAAGAAACTGGGAGAGCATCACTCCAGAAAGTCTTCT-CAAT 53014
Query 33509 GGATACCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATG 33568
|| || | || ||||| ||| | | | ||| |||||||| |||||
Sbjct 53015 ATTGACAGCCTCGGTCATAATTTTCTTAATAATAACCTTACTAGGTGGATGCTTCAAATG 53074
Query 33569 TTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTT 33628
|||| | ||||||||||| || |||||||| || || | ||| | || ||
Sbjct 53075 AGAGAACAAGAGGCATGCGAAATCAGTATGTAGACCCTCATCCCTGCAAATAAGCTCATT 53134
Query 33629 AGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGA 33688
|| || || ||||| ||||| | || | ||| || | ||| || || || || || ||
Sbjct 53135 GGAGAAGGTAAGTCCAGGCATCAAACCTCTCTTCTTCAACCAGAAGATAGAGGCAAACGA 53194
Query 33689 TCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGC 33748
|| || ||||| | || || | ||||||||||| | | |||||| |||| ||
Sbjct 53195 GCCAGAGAAGAAAACACCCTCGATGGCAGCAAAGGCGACCAATCTCTCAGCATACAAAGC 53254
Query 33749 GCTGTCA---TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33805
||| | |||||| | |||||| ||||| | || | | || || ||
Sbjct 53255 ATCATCATTGTTTATCCATCTCAAAGCCCATAGAGCCTTTTCCTTAATAGGTGGAATGGT 53314
Query 33806 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA 33865
| || ||||| || | |||| || || | || | | || || || | ||
Sbjct 53315 ATGGATAGCATTGAACAAGTAGTCGGACTCCTTCTTGTCGGTGATGTACGTTTCAAGTAA 53374
Query 33866 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 33925
||| || | || || || ||||| |||| ||||| || ||||| || |||
Sbjct 53375 AAGGGAGTAGGTCTCAGAGTGGATGTTCTCAACCATAATCTGGAAACCGTAAAAGGCTCT 53434
Query 33926 AGCCTC-GGTAATCTGCA-CTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATT 33983
|| || |||||| || | || || | |||| || ||| || || || | || ||
Sbjct 53435 TGCTTCTGGTAAT-TGAACCTGCTTCATGAAAT-TTTGTGCCAAGTTCTCGTCAACAATA 53492
Query 33984 CCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT 34043
|||||| || |||||||| ||||| ||| | |||||| ||| | |||| ||| ||
Sbjct 53493 CCATCAGAAGCGGCAAAAAATGCCAAAACACGCGATATAAAGTATCTCTCGT-TGGCATT 53551
Query 34044 AGT----TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAA 34099
| || ||||| ||| | | || ||||| | ||| | || || | ||||||||
Sbjct 53552 CATCTTGTTGTTCCAGTCAGTCAAGTCCTTAGAGAGATCAATCTCCTCAGCAGTCCAAAA 53611
Query 34100 TGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAAC 34159
|| ||||| ||||| |||||||| | ||| || |||| || || || ||||| || ||
Sbjct 53612 AGAGGCCTCCGCCTTCTTATACATTTGCCATATATCATCGTACTGAATAGGGAACATCAC 53671
Query 34160 AAATCT 34165
||||||
Sbjct 53672 AAATCT 53677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629809900479840
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