Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq14 297 3e-75
seq290 205 1e-47
>seq14
Length=27313
Score = 297 bits (328), Expect = 3e-75
Identities = 1331/2074 (64%), Gaps = 61/2074 (3%)
Strand=Plus/Plus
Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777
|||||||| |||| | | |||| | ||||| | |||||||| || || || | |
Sbjct 16365 GTGAATTGGATGGCACGAGCAGCGGCCTGTGTACGCAAGTAGTACATACCTGTCTTCAAA 16424
Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGA-ATAACTCG-GATCTGCTA 78835
|| |||| ||||| || ||||| ||| | || ||| | | ||| ||| |
Sbjct 16425 CCCTTCTTCCAGCCGTAAAAGTGCATGGACGTCAACTTACCCATAGTTGGCGAT-TGCAA 16483
Query 78836 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 78895
||||| ||||| |||||| || ||| |||| || ||||| |||||||| | |
Sbjct 16484 G-TGGATGTTCATGGATTGAGACTGGCAAATGTAGGCACCTCTGTCGGCAGCCATGTCGA 16542
Query 78896 TGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 78955
||| | || || | || |||||||| ||| | || | | |||||| | |||||||
Sbjct 16543 TGACAGATTTCTGAGAAAGTTCCCAAACAGTCCTGTACAATTTCTTAATGTTGTCTGGAA 16602
Query 78956 GGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCAT 79012
|| | || ||||||||||||||| || || || |||||| || | || |
Sbjct 16603 TATTAGGTAAGTTCTGAATGGATCCATTGTCATGAATGATGAAATTCTTCATTGCATCGT 16662
Query 79013 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTC 79072
|||||| | | || | | | || || | | ||||| || | || || || |
Sbjct 16663 TCCATATTCCCATATCAATAAGGTCCCTTAGCATGTAAGGATTGACAATCTGGAACTCAC 16722
Query 79073 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTC 79132
||| | ||||| | || || ||| ||| |||| || | | || || | |
Sbjct 16723 CAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGGCTCAAAGCACTCGTTGTAAC 16782
Query 79133 CCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 79192
||| ||| |||| || || || ||||||||||| || ||||| | |||||||||||
Sbjct 16783 CCATAATCTGAGAGGTAGAGGCAGTTGGCATAGGAGCGACCAAAAGCGAATTTCTAAGAC 16842
Query 79193 CGTA-TGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACA 79251
| | | | | ||| || | || | || ||||||||||| ||||||| || |
Sbjct 16843 CATCCTTAGC-GATCTTGGCCTTCAAAGTCTCCCAATCCCACAGATCAGTTGGCTTCTTA 16901
Query 79252 TTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAA 79311
||||| | ||| || || |||||||| || ||| || ||| ||| || || ||
Sbjct 16902 TTCCACATATCGTACTGGAGAATACCCTTGGAAGCTGGAGAGCCTTCGTAGGTCTCGTAC 16961
Query 79312 GGTCCTTCCTTTTCGG----CTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGT 79367
| || || | | | || ||| | || ||| | || || | || | |||
Sbjct 16962 GTACCCTCTTCCACAGAAAGCTGATTTG--ATTC--CTCCAGAGCACCATGGTACAAGGT 17017
Query 79368 TTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAG-A 79426
||||| |||| | || || || | |||||| ||| |||||||| ||| | || |
Sbjct 17018 CTCGAATATCTGTATGTTAAGCTCACGAGCTTCTGGGCAGTCAAATGGC-AATCTGAGCA 17076
Query 79427 GAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAG 79486
| |||| || || | ||||||||||||| | |||||||||| | |||| | || |
Sbjct 17077 TGAAGAACGTATCCGCAAGACCTTGAACACCAAGAGCGATAGGTCTGTTTCTCATGTTGG 17136
Query 79487 AAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCC--- 79543
| | || ||||||| || || ||||| | || || | || | || |
Sbjct 17137 AGTTGCGGGCCTCTGGAACTGGGTAGTAATTCCTGTCAATGACACGGTTCAAGTTACGTG 17196
Query 79544 TGACTA------TTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATCTA 79597
|||| | | | ||| || | || | |||| || | | ||| | |
Sbjct 17197 TGACAACCTTGGTGATCTTGTGCAACTTCTCAAAGTTGAACCAAC--AGTGATCCTTGTC 17254
Query 79598 TTACA-AACATGTTCA---ACGCGACAGAT-GCCAGATTACAAACGGCTACCTCATTAGC 79652
|| |||| | || | || | | | |||| ||||| || | ||||||| |
Sbjct 17255 GGACTCAACAAATGCAGGCAAGCAAATGTTTGCCAAGTTACACACACCGACCTCATCTGG 17314
Query 79653 ATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTG 79712
| | || | | | ||| ||| | || | |||| |||||||| || || |
Sbjct 17315 AGAAGAGTACTCGACAACCTCACAGCACAAATTCGAAGACTTGATGGTTCCCAAGTTCTT 17374
Query 79713 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAAT 79772
||||||||||||| |||| || |||||||| |||| ||||| || ||||| ||||| |
Sbjct 17375 TTGATTACTCTTTCTGTTGCAGGCATCCTTGTAAATCATGAAAGGCGTACCGGTTTCTGT 17434
Query 79773 CTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGACTTGTATCTCT 79831
||||| || | |||| | ||| | | || ||||||| | | ||| | | |
Sbjct 17435 CTGAGCCTCCAAAATCTGATACCACAACTTCT-GAGCCTTAACGGTT--CTTCTTCCACG 17491
Query 79832 TTTCTCTTTC--GTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAA 79889
| ||| ||| ||| | || || || ||| |||||||| || ||||||| |
Sbjct 17492 TCCCTCCTTCTCGTAACGAGTGTACAACTTTTCAAACTCGTCACCATAAACATCTGAAAG 17551
Query 79890 TCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTT---ACTCGTTT 79946
|| || || |||| | | ||| | ||| | ||||| | | || || ||
Sbjct 17552 ACCTGGGGCCTCAGAAGGAGAAAACAAAGTCCA---TGTATCATTTTGTTCAACACGCTT 17608
Query 79947 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTT 80006
||| || |||||||| |||||||||||| || | ||| | | | |||||| ||
Sbjct 17609 CATGAATAGATCAGGGATCCAAAGAGCTGGGAACAAATCACGTGCACGGATCTCCTCCTT 17668
Query 80007 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 80066
|| |||||| | | ||||| ||| | | ||||| | |||||| ||||| |||||
Sbjct 17669 ACCGTGATTCTTCCTGATATCGATGAAGTCAAAGATATCTGCATGCCAAGGTTCTAAGTA 17728
Query 80067 TATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 80126
|| || || | || |||| ||||| || || || || | || ||||| || | ||
Sbjct 17729 GATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGGTCAACATACCTAGCAGTACTGTT 17788
Query 80127 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCT 80186
| || | | ||| ||||||||||||||||||||||| ||||| || | || ||
Sbjct 17789 GAACACACGAACCATAGGAATAATACCATTGGATGTACCGTTGGTACCAGCAATGTATGA 17848
Query 80187 TCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 80246
|| | | |||||| ||| ||| |||||| || || || ||| | || || || ||
Sbjct 17849 ACCTGTAGAACGAATGTTATGAATATGTAGACCAATACCACCAGCCGTCTTGGAAATCAA 17908
Query 80247 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAG 80306
|| || |||| || || || ||||| || || || ||||| |||| || ||
Sbjct 17909 GGCACACTGTTTCAAAGTGTCGTAGATACCTTCAATAGAGTCATCCTTCATTGCAACTAA 17968
Query 80307 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 80366
|| || ||||| || | || ||| || |||||||| || || ||||| |||||
Sbjct 17969 GAAGCAAGACGACATCTGTGGGCGTGGAGTACCGGCATTAAACAATGTTGGAGAGGCGTG 18028
Query 80367 CGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATT 80425
|| || || | | |||| | || |||| ||| | | || ||||| ||
Sbjct 18029 TGTGAAGTATCTCTTCGACATCAAATCATACGACTCCAAAACTTTAGGAATATCATCACC 18088
Query 80426 GATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTAT 80485
| |||||||| || || || | ||| | | |||||||| || || | | ||| ||
Sbjct 18089 G-TGAATTCCAACGGCAACTCTCATAAGAAGATGCTGAGGCCTCTCTGCAACCTTACCAT 18147
Query 80486 TTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAA 80543
|||| |||||| || || || | || ||||| ||||| ||||| || |||||
Sbjct 18148 TTATCCTCAACAGATATGAACGCTCTAGGGTCTTAAAGCCAAAGTAGTTATAGCTGAAA- 18206
Query 80544 GTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCAT 80603
|| || || || |||| ||||||| | | |||||| | || | || ||| |
Sbjct 18207 -TCACGGTCATAGTTAATGGCCGAGTTCAACTCATCCTTGTGCTTCATGAC--AATC--T 18261
Query 80604 GGTGA--TACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGA 80659
|| | | ||| || || || || || | ||| |||| || ||| |||||||
Sbjct 18262 TGTAAACTTCTTCAGAGATCATAGGGGATTTCTTCTGGGTTTTTGGGTTATAATAGTTGT 18321
Query 80660 ATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGG 80719
| | ||| || || || ||| ||| | || || || | |||||| | ||| || | ||
Sbjct 18322 AAAGATCTTCAATAACATCAGAGAATGGCTTCTTAGTCTGCTTGTGCAAATTAGAAATGG 18381
Query 80720 CTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753
| | ||||||||| ||| | ||||||||||||||
Sbjct 18382 CAAGTCTGGCGGCCAAAGTAGCATAATCTGGATG 18415
>seq290
Length=58723
Score = 205 bits (226), Expect = 1e-47
Identities = 596/906 (66%), Gaps = 14/906 (2%)
Strand=Plus/Plus
Query 49648 TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTT 49707
|||| | |||||| || || ||||| ||| || | || || || || |||||
Sbjct 52776 TCTTTTGCCATAACACCAGCCTTCTGGTAGTCAGAAACTCTCTTCTCAAAGAAGTTAGTC 52835
Query 49708 TTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAttttt 49767
|| || |||| || || || ||||| || || || ||||||||| |||| |||| |||
Sbjct 52836 TTACCAGCCAAGGAAATGTTCTCCATAAAGTCGAATGGATTGGTAGCATTGTAAACTTTC 52895
Query 49768 ttAAATCCCAATTCAGAAATCAATCTATCCGCGACA-AATTCTATATATGTTTTCATCAT 49826
| | ||||||| || || |||||| || || ||| ||||| | ||| ||||||
Sbjct 52896 TCACATCCCAAAGCAATAAGCAATCTGTCGGC-ACAGAATTCAACATAATGGGCCATCAT 52954
Query 49827 TTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTA-AGAAATTCTTGTTCAA 49885
|| | ||||| || | | |||||| ||||| || | ||||| |||| | |||
Sbjct 52955 ATCGAAGTTCATACCAAGCAAAGAAACTGGGAGAGCATCACTCCAGAAAGTCTTCT-CAA 53013
Query 49886 TGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAAT 49945
| || || || || ||||| ||| | | | ||| ||||||||| ||||
Sbjct 53014 TATTGACAGCCTCGGTCATAATTTTCTTAATAATAACCTTACTAGGTGGATGCTTCAAAT 53073
Query 49946 GTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGT 50005
| |||| | ||||||||||| || |||||||| || || | ||| || || |
Sbjct 53074 GAGAGAACAAGAGGCATGCGAAATCAGTATGTAGACCCTCATCCCTGCAAATAAGCTCAT 53133
Query 50006 TGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATG 50065
|||| || || ||||| ||||| | || | ||| || | ||| || || || ||||| |
Sbjct 53134 TGGAGAAGGTAAGTCCAGGCATCAAACCTCTCTTCTTCAACCAGAAGATAGAGGCAAACG 53193
Query 50066 ACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG 50125
| ||||| ||||| | || || | || |||||||| || | |||||| |||| |
Sbjct 53194 AGCCAGAGAAGAAAACACCCTCGATGGCAGCAAAGGCGACCAATCTCTCAGCATACAAAG 53253
Query 50126 CGCTGTCA---TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 50182
| ||| | |||||| | |||||| ||||| | || | | || || |
Sbjct 53254 CATCATCATTGTTTATCCATCTCAAAGCCCATAGAGCCTTTTCCTTAATAGGTGGAATGG 53313
Query 50183 TTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCA 50242
| | || ||||| || | |||| || || | || | | || || || | |
Sbjct 53314 TATGGATAGCATTGAACAAGTAGTCGGACTCCTTCTTGTCGGTGATGTACGTTTCAAGTA 53373
Query 50243 AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATC 50302
|||| || | || || || ||||| |||| ||||| || ||||| || ||
Sbjct 53374 AAAGGGAGTAGGTCTCAGAGTGGATGTTCTCAACCATAATCTGGAAACCGTAAAAGGCTC 53433
Query 50303 TAGCCTC-GGTAATCTGCA-CTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTAT 50360
| || || |||||| || | || || | |||| || || || || || | || ||
Sbjct 53434 TTGCTTCTGGTAAT-TGAACCTGCTTCATGAAAT-TTTGTGCCAAGTTCTCGTCAACAAT 53491
Query 50361 TCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGT 50420
|| ||| || |||||||| ||||| ||| | |||||| | | | ||||||| |
Sbjct 53492 ACCATCAGAAGCGGCAAAAAATGCCAAAACACGCGATATAAAGTATCTCTCGTTGGCATT 53551
Query 50421 TA---GTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAA 50477
| || ||||| ||| | | || ||||| | ||| | || || | ||||||||
Sbjct 53552 CATCTTGTTGTTCCAGTCAGTCAAGTCCTTAGAGAGATCAATCTCCTCAGCAGTCCAAAA 53611
Query 50478 TGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAAC 50537
|| ||||| ||||| |||||||| | ||| || |||| || || || ||||| || ||
Sbjct 53612 AGAGGCCTCCGCCTTCTTATACATTTGCCATATATCATCGTACTGAATAGGGAACATCAC 53671
Query 50538 AAATCT 50543
||||||
Sbjct 53672 AAATCT 53677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718260019163920
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