Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq290 224 1e-53
>seq290
Length=58723
Score = 224 bits (248), Expect = 1e-53
Identities = 589/888 (66%), Gaps = 17/888 (2%)
Strand=Plus/Plus
Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640
|| || || ||| |||||| || |||||||||||||| ||||| ||| || || ||
Sbjct 52797 TTCTGGTAGTCAGAAACTCTCTTCTCAAAGAAGTTAGTCTTACCAGCCAAGGAAATGTTC 52856
Query 13641 TCCATAAAATCAAATGGATTTATTGACATAAACACTTTATCACAACCTAGTTCTAATAGT 13700
|||||||| || |||||||| | | | | ||||| ||||| || | | | ||
Sbjct 52857 TCCATAAAGTCGAATGGATTGGTAGCATTGTAAACTTTCTCACATCCCAAAGCAATAAGC 52916
Query 13701 AATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 13760
||||| || ||| || |||| ||| || | ||| | ||| | |||||||| | |
Sbjct 52917 AATCTGTCGGCACAGAATTCAACATAATGGGCCATCATATCGAAGTTCATACCAAGCAAA 52976
Query 13761 TTTACAGGAATTATATTGGTTAA-AAATTCTTTTTCTATAGACACAGCCTCTTTTATAAT 13819
|| || | || | | ||| |||| | | ||| |||||||| | |||||
Sbjct 52977 GAAACTGGGAGAGCATCACTCCAGAAAGTCTTCT-CAATATTGACAGCCTCGGTCATAAT 53035
Query 13820 AATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 13879
| ||||||| | ||| ||| |||| || | ||| || | | || || ||
Sbjct 53036 TTTCTTAATAATAACCTTACTAGGTGGATGCTTCAAATGAGAGAACAAGAGGCATGCGAA 53095
Query 13880 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 13939
|||| ||| || |||||||| || | |||||| || || || || || | ||| |||||
Sbjct 53096 ATCAGTATGTAGACCCTCATCCCTGCAAATAAGCTCATTGGAGAAGGTAAGTCCAGGCAT 53155
Query 13940 CAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTC 13999
||| |||| || || ||||| || || | ||||| || || || ||||| | |||||
Sbjct 53156 CAAACCTCTCTTCTTCAACCAGAAGATAGAGGCAAACGAGCCAGAGAAGAAAACACCCTC 53215
Query 14000 AACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTT 14059
| |||||||| || | |||| || || || | || | | || ||||||| |
Sbjct 53216 GATGGCAGCAAAGGCGACCAATCTCTCAGCATACAAAGCATCATCATTGTTTATCCATCT 53275
Query 14060 TCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATA 14119
||||||| || |||| |||||| || || | |||||||| || || ||
Sbjct 53276 CAAAGCCCATAGAGCCTTTTCCTTAATAGGTGGAATGGTATGGATAGCATTGAACAAGTA 53335
Query 14120 TTCCTTCTCTTTAGTACTTGAAATGTATGTATCAA-TAAGTAAGCTA-TACATTTCAGAG 14177
|| ||| || | | ||||| || |||| ||| ||| | || | ||||||
Sbjct 53336 GTCGGACTCCTTCTTGTCGGTGATGTACGTTTCAAGTAA--AAGGGAGTAGGTCTCAGAG 53393
Query 14178 TGTATGTTTTC---CATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGT 14234
|| ||||| || |||| ||||| ||||| |||||| ||| ||||| | ||||
Sbjct 53394 TGGATGTTCTCAACCATA---ATCTGGAAACCGTAAAAGGCTCTTGCTTCTGGTAATTGA 53450
Query 14235 ACTTCCGAG-TAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAA 14293
|| | | | |||| ||| ||||| || || | ||| ||||||||| ||| |||||
Sbjct 53451 ACCTGCTTCATGAAAT-TTTGTGCCAAGTTCTCGTCAACAATACCATCAGAAGCGGCAAA 53509
Query 14294 AAATGCCAATATGTTTTTAATAAAGTATTGCTCTT---CATTGTTGAGTTTTTTCCAATC 14350
||||||||| | ||||||||| ||| | |||| | || ||||| ||
Sbjct 53510 AAATGCCAAAACACGCGATATAAAGTATCTCTCGTTGGCATTCATCTTGTTGTTCCAGTC 53569
Query 14351 GGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTT 14410
| || |||||||| ||||| | || ||| | ||||||||| || | || || ||
Sbjct 53570 AGTCAAGTCCTTAGAGAGATCAATCTCCTCAGCAGTCCAAAAAGAGGCCTCCGCCTTCTT 53629
Query 14411 ATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT 14458
||||||| |||||| || | || ||||| || | ||||||||
Sbjct 53630 ATACATTTGCCATATATCATCGTACTGAATAGGGAACATCACAAATCT 53677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479722135325200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |