Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq290 255 6e-63
>seq290
Length=58723
Score = 255 bits (282), Expect = 6e-63
Identities = 614/914 (67%), Gaps = 15/914 (2%)
Strand=Plus/Plus
Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428
|| || || ||| |||||| || ||||| |||||||| ||||| ||| || || ||
Sbjct 52797 TTCTGGTAGTCAGAAACTCTCTTCTCAAAGAAGTTAGTCTTACCAGCCAAGGAAATGTTC 52856
Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAAT 13488
|||||||| ||||||||||| || | | | ||||| ||||| || | | |||||
Sbjct 52857 TCCATAAAGTCGAATGGATTGGTAGCATTGTAAACTTTCTCACATCCCAAAGC-AATAAG 52915
Query 13489 -AATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13547
||||| || ||| || |||| ||| || | ||| | ||| | |||||||| | |
Sbjct 52916 CAATCTGTCGGCACAGAATTCAACATAATGGGCCATCATATCGAAGTTCATACCAAGCAA 52975
Query 13548 TTTTACAGGAATTATATTAGTTAA-AAATTCTTTTTCTATAGACACAGCCTCGTTTATAA 13606
|| || | || | | | ||| |||| | | ||| ||||||||| | ||||
Sbjct 52976 AGAAACTGGGAGAGCATCACTCCAGAAAGTCTTCT-CAATATTGACAGCCTCGGTCATAA 53034
Query 13607 TAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAA 13666
| |||||||||| | ||| ||| |||| || | ||| || | | || || |
Sbjct 53035 TTTTCTTAATAATAACCTTACTAGGTGGATGCTTCAAATGAGAGAACAAGAGGCATGCGA 53094
Query 13667 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCA 13726
||||| ||| || |||||||| || | |||||| || || || || || | ||| ||||
Sbjct 53095 AATCAGTATGTAGACCCTCATCCCTGCAAATAAGCTCATTGGAGAAGGTAAGTCCAGGCA 53154
Query 13727 TCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCT 13786
|||| |||| || || ||||| || || | || || || || || ||||| | ||||
Sbjct 53155 TCAAACCTCTCTTCTTCAACCAGAAGATAGAGGCAAACGAGCCAGAGAAGAAAACACCCT 53214
Query 13787 CAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATT 13846
| | |||||||| || | | || || || || | || | | || |||||||
Sbjct 53215 CGATGGCAGCAAAGGCGACCAATCTCTCAGCATACAAAGCATCATCATTGTTTATCCATC 53274
Query 13847 TTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAAT 13906
| ||||||| || |||| |||||| || || | ||| |||||||| || |
Sbjct 53275 TCAAAGCCCATAGAGCCTTTTCCTTAATAGGTGGAATGGTATGGATAGCATTGAACAAGT 53334
Query 13907 GTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAA-TAAGTAAGCTA-TACATTTCAGA 13964
|| ||| || | | ||||| || |||| ||| ||| | || | |||||
Sbjct 53335 AGTCGGACTCCTTCTTGTCGGTGATGTACGTTTCAAGTAA--AAGGGAGTAGGTCTCAGA 53392
Query 13965 GTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTAC 14024
||| ||||| || | ||||| ||||| ||||| ||| ||||||| |||| ||
Sbjct 53393 GTGGATGTTCTCAACCATAATCTGGAAACCGTAAAAGGCTCTTGCTTCTGGTAATTGAAC 53452
Query 14025 CTCCGAG-TAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAA 14083
|| | | |||| ||| ||||||||| || | ||||||||||||| ||| |||||||
Sbjct 53453 CTGCTTCATGAAAT-TTTGTGCCAAGTTCTCGTCAACAATACCATCAGAAGCGGCAAAAA 53511
Query 14084 ATGCCAATATGTTTTTAATAAAGTATTGCTCTT---CATTGTTGAGTTTTTTCCAATCGG 14140
||||||| | ||||||||| ||| | |||| | || ||||| || |
Sbjct 53512 ATGCCAAAACACGCGATATAAAGTATCTCTCGTTGGCATTCATCTTGTTGTTCCAGTCAG 53571
Query 14141 CTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTAT 14200
|| |||||||| ||||| | || ||| | ||||||||| || | || || ||||
Sbjct 53572 TCAAGTCCTTAGAGAGATCAATCTCCTCAGCAGTCCAAAAAGAGGCCTCCGCCTTCTTAT 53631
Query 14201 ACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCTTGAAGATGTT-TCT 14259
||||| |||||| || | || ||||| || | ||||||| || ||||| ||
Sbjct 53632 ACATTTGCCATATATCATCGTACTGAATAGGGAACATCACAAATC-TGTGTATGTTCTCC 53690
Query 14260 TTAAGAATTGGCTC 14273
||||| | |||||
Sbjct 53691 TTAAGCAAAGGCTC 53704
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478582949251920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |