Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq14 253 3e-62
seq290 230 3e-55
>seq14
Length=27313
Score = 253 bits (280), Expect = 3e-62
Identities = 709/1074 (66%), Gaps = 22/1074 (2%)
Strand=Plus/Plus
Query 71774 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 71833
||||||||||||| || || | ||||||||||||| |||| || |||||||| |||| |
Sbjct 17353 ACTTGATGGTTCCCAAGTTCTTTTGATTACTCTTTCTGTTGCAGGCATCCTTGTAAATCA 17412
Query 71834 TAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCC 71892
| || || ||||| ||||| |||||| || | |||| | ||| | | || |||||
Sbjct 17413 TGAAAGGCGTACCGGTTTCTGTCTGAGCCTCCAAAATCTGATACCACAACTTCT-GAGCC 17471
Query 71893 TTTATTATA-TTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTC 71951
|| | | ||||| | || | || | ||||| | || || || ||| |||||
Sbjct 17472 TTAACGGTTCTTCTTCCACGTCCCTCCT-TCTCGTAACGAGTGTACAACTTTTCAAACTC 17530
Query 71952 GTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCC 72011
||| || || ||| | || || ||| ||| | | ||| | ||| |
Sbjct 17531 GTCACCATAAACATCTGAAAGACCTGGGGCCTCAGAAGGAGAAAACAAAGTCCA---TGT 17587
Query 72012 ATCATCATTT---ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATC 72068
||||| | | || || ||||| || |||||||| |||||||||||| || | |||
Sbjct 17588 ATCATTTTGTTCAACACGCTTCATGAATAGATCAGGGATCCAAAGAGCTGGGAACAAATC 17647
Query 72069 TCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATC 72128
| | | |||||| || || |||||| | | ||||| ||| | | |||||
Sbjct 17648 ACGTGCACGGATCTCCTCCTTACCGTGATTCTTCCTGATATCGATGAAGTCAAAGATATC 17707
Query 72129 AGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATC 72188
| |||||| ||||| ||||| || || || | || || | ||||| || || || ||
Sbjct 17708 TGCATGCCAAGGTTCTAAGTAGATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGGTC 17767
Query 72189 TATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACC 72248
| || ||||| || | || | || | | ||| ||||||||||||||||||| |||
Sbjct 17768 AACATACCTAGCAGTACTGTTGAACACACGAACCATAGGAATAATACCATTGGATGTACC 17827
Query 72249 ATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCC 72308
||||| || | || || || | | |||||| || ||| |||||| || ||
Sbjct 17828 GTTGGTACCAGCAATGTATGAACCTGTAGAACGAATGTTATGAATATGTAGACCAATACC 17887
Query 72309 CCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACT 72368
|| ||| | || || || || || || |||| || || || ||||| || || |||
Sbjct 17888 ACCAGCCGTCTTGGAAATCAAGGCACACTGTTTCAAAGTGTCGTAGATACCTTCAATAGA 17947
Query 72369 ATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATT 72428
|||||| |||| || || || || ||||| || | || ||| || |||||
Sbjct 17948 GTCATCCTTCATTGCAACTAAGAAGCAAGACGACATCTGTGGGCGTGGAGTACCGGCATT 18007
Query 72429 AAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAAT 72488
||| || || ||||| ||||| || || || | | |||| | || |||| ||| |
Sbjct 18008 AAACAATGTTGGAGAGGCGTGTGTGAAGTATCTCTTCGACATCAAATCATACGACTCCAA 18067
Query 72489 AGCTGATTCTATATC-CCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAG 72547
| || ||||| || | || ||||| || || || | ||| | | ||||||||
Sbjct 18068 AACTTTAGGAATATCATCACCG-TGAATTCCAACGGCAACTCTCATAAGAAGATGCTGAG 18126
Query 72548 GTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAAC 72607
| || || | | ||| |||||| |||||| || || || | || ||||| |
Sbjct 18127 GCCTCTCTGCAACCTTACCATTTATCCTCAACAGATATGAACGCTCTAGGGTCTTAAAGC 18186
Query 72608 CAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTT 72665
|||| ||||| || ||||| || || || || |||| |||| || | | ||||||
Sbjct 18187 CAAAGTAGTTATAGCTGAAA--TCACGGTCATAGTTAATGGCCGAGTTCAACTCATCCTT 18244
Query 72666 ATATTTGTTAACTATATCCATGGTGA-TACTT--GAAATAATCGGAGAATGTTTCCCATT 72722
| || | || || | || | | ||| || || || || || | ||| |
Sbjct 18245 GTGCTTCATGACAAT---CTTGTAAACTTCTTCAGAGATCATAGGGGATTTCTTCTGGGT 18301
Query 72723 TTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTC 72782
||| || ||| ||||||| | | ||| || || || ||| ||| | || || || |
Sbjct 18302 TTTTGGGTTATAATAGTTGTAAAGATCTTCAATAACATCAGAGAATGGCTTCTTAGTCTG 18361
Query 72783 CTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836
|||||| | ||| || | ||| | ||||||||| | | | ||||||||||||||
Sbjct 18362 CTTGTGCAAATTAGAAATGGCAAGTCTGGCGGCCAAAGTAGCATAATCTGGATG 18415
Score = 113 bits (124), Expect = 6e-20
Identities = 352/534 (66%), Gaps = 11/534 (2%)
Strand=Plus/Plus
Query 70801 GTAAACTGAATGGGA-GAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAG 70859
|| || || |||| | ||| | ||||| | ||||| | |||||||| ||||| || |
Sbjct 16365 GTGAATTGGATGGCACGAGCA-GCGGCCTGTGTACGCAAGTAGTACATACCTGTCTTCAA 16423
Query 70860 ACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAG-GATCGGCT 70917
||| |||| |||||||| ||||| ||| | || |||| | | ||| |
Sbjct 16424 ACCCTTCTTCCAGCCGTAAAAGTGCATGGACGTCAACTTACCCATAGTTGGCGATTGC-- 16481
Query 70918 ATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTT 70977
| ||| || ||||| || ||| || ||| |||| || ||||| |||||||| |
Sbjct 16482 AAGTGGATGTTCATGGATTGAGACTGGCAAATGTAGGCACCTCTGTCGGCAGCCATGTCG 16541
Query 70978 ATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGA 71037
|||| | || || | || |||||||| ||| | || | | |||||| | ||||||
Sbjct 16542 ATGACAGATTTCTGAGAAAGTTCCCAAACAGTCCTGTACAATTTCTTAATGTTGTCTGGA 16601
Query 71038 AGGTTTG-TA--TTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCA 71094
| || | || ||||||||||||||| || ||| || ||| || || | ||
Sbjct 16602 ATATTAGGTAAGTTCTGAATGGATCCATTGTCATGAATGATGAAATTCTTCATTGCATCG 16661
Query 71095 TTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCT 71154
||||||| | | || | | | || || | | |||||| || | || || ||
Sbjct 16662 TTCCATATTCCCATATCAATAAGGTCCCTTAGCATGTAAGGATTGACAATCTGGAACTCA 16721
Query 71155 CCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTT 71214
|||| | ||||| | || || ||| ||| | || || | |||| || |
Sbjct 16722 CCAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGGCTCAAAGCACTCGTTGTAA 16781
Query 71215 CCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGA 71274
|||| ||| |||| || || ||||| |||||||| || ||||| || ||||||||||
Sbjct 16782 CCCATAATCTGAGAGGTAGAGGCAGTTGGCATAGGAGCGACCAAAAGCGAATTTCTAAGA 16841
Query 71275 CCAT-GTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGG 71327
|||| | | | ||| || | || | || ||||||| ||| ||||| | |||
Sbjct 16842 CCATCCTTAGC-GATCTTGGCCTTCAAAGTCTCCCAATCCCACAGATCAGTTGG 16894
>seq290
Length=58723
Score = 230 bits (254), Expect = 3e-55
Identities = 603/907 (66%), Gaps = 16/907 (2%)
Strand=Plus/Plus
Query 41753 TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTC 41812
|||| | |||||| || || ||||| ||| || | || || || || ||||||
Sbjct 52776 TCTTTTGCCATAACACCAGCCTTCTGGTAGTCAGAAACTCTCTTCTCAAAGAAGTTAGTC 52835
Query 41813 TTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAttttt 41872
|| || |||| || || || ||||| || || || ||||||||| |||| |||| |||
Sbjct 52836 TTACCAGCCAAGGAAATGTTCTCCATAAAGTCGAATGGATTGGTAGCATTGTAAACTTTC 52895
Query 41873 ttAAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATT 41932
| | ||||||| || || |||||| || || |||||| | ||| ||||||
Sbjct 52896 TCACATCCCAAAGCAATAAGCAATCTGTCGGCACAGAATTCAACATAATGGGCCATCATA 52955
Query 41933 TCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTA-AGAAATTCTTGTTCAAT 41991
|| | ||||| || | | |||||| ||||| || | ||||| |||| | ||||
Sbjct 52956 TCGAAGTTCATACCAAGCAAAGAAACTGGGAGAGCATCACTCCAGAAAGTCTTCT-CAAT 53014
Query 41992 AGAGACCGCGTCTGTTATAATAGATCTTACTGTTT-CTTCACTCGGTGGATACAATAAAT 42050
| ||| || || || ||||| ||||| | | | | ||| ||||||| | ||||
Sbjct 53015 ATTGACAGCCTCGGTCATAATTT-TCTTAATAATAACCTTACTAGGTGGATGCTTCAAAT 53073
Query 42051 GTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGT 42110
| |||| | ||||||||||| || ||||||||||| || | ||| | || |
Sbjct 53074 GAGAGAACAAGAGGCATGCGAAATCAGTATGTAGACCCTCATCCCTGCAAATAAGCTCAT 53133
Query 42111 TGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATG 42170
|||| || || ||||| ||||| | || | ||| || | ||| || ||||| ||||| |
Sbjct 53134 TGGAGAAGGTAAGTCCAGGCATCAAACCTCTCTTCTTCAACCAGAAGATAGAGGCAAACG 53193
Query 42171 ATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG 42230
| ||||| ||||| | || || | || |||||||| | | |||||| |||| |
Sbjct 53194 AGCCAGAGAAGAAAACACCCTCGATGGCAGCAAAGGCGACCAATCTCTCAGCATACAAAG 53253
Query 42231 CACTGTCA---TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 42287
|| ||| | |||||| | |||||| ||||| | || | | || || |
Sbjct 53254 CATCATCATTGTTTATCCATCTCAAAGCCCATAGAGCCTTTTCCTTAATAGGTGGAATGG 53313
Query 42288 TTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCA 42347
| | || ||||| || | |||| || || | || | | || || || | |
Sbjct 53314 TATGGATAGCATTGAACAAGTAGTCGGACTCCTTCTTGTCGGTGATGTACGTTTCAAGTA 53373
Query 42348 AAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATC 42407
|||| || | || || || ||||| |||| ||||| || ||||| || ||
Sbjct 53374 AAAGGGAGTAGGTCTCAGAGTGGATGTTCTCAACCATAATCTGGAAACCGTAAAAGGCTC 53433
Query 42408 TGGCCTC-GGTAACCTGTA-CTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTAT 42465
| || || ||||| || | || || | |||| || || || || |||| || ||
Sbjct 53434 TTGCTTCTGGTAA-TTGAACCTGCTTCATGAAAT-TTTGTGCCAAGTTCTCGTCAACAAT 53491
Query 42466 TCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGT 42525
|| ||| || |||||||| ||||| ||| | |||||| ||| | |||| || |
Sbjct 53492 ACCATCAGAAGCGGCAAAAAATGCCAAAACACGCGATATAAAGTATCTCTCGT-TGGCAT 53550
Query 42526 TAAT----TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAA 42581
| || || ||||| ||| | | || ||||| | ||| | || || | |||||||
Sbjct 53551 TCATCTTGTTGTTCCAGTCAGTCAAGTCCTTAGAGAGATCAATCTCCTCAGCAGTCCAAA 53610
Query 42582 ATGATGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAA 42641
| || || || ||||| |||||||| | ||| ||||||| || ||||| ||||| || |
Sbjct 53611 AAGAGGCCTCCGCCTTCTTATACATTTGCCATATATCATCGTACTGAATAGGGAACATCA 53670
Query 42642 CAAATCT 42648
|||||||
Sbjct 53671 CAAATCT 53677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671130995323280
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