Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq187 105 1e-17
seq14 96.9 5e-15
>seq187
Length=11729
Score = 105 bits (116), Expect = 1e-17
Identities = 378/584 (65%), Gaps = 14/584 (2%)
Strand=Plus/Plus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAAT-GCAATGTCACG 96865
|| ||||| | |||| ||| |||| || |||||| | ||| ||| ||| || || |
Sbjct 2074 ACCAACGGGACATCCAGCGGCATAGTTCCGATGCTCCGGGTGTTCAACAGCACTGCCAAG 2133
Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925
|| || |||||||| || || ||||| || || || | || ||||| || ||
Sbjct 2134 -TATGTGGACCAGGGCGGAAACAAGCGGCCCGGTGCGATTTGTGCGTATTTGGAGCCGTG 2192
Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985
||| || ||| | | || || |||| || |||||| ||| || ||| ||
Sbjct 2193 GCATGCAGACATCATGGAATTCCTCGATTTGAAGAAAAACCACGGCAAGGAGGAGATGCG 2252
Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC---AA 97042
||| |||| | || |||||| | ||| | || || ||||||||| ||| ||| ||
Sbjct 2253 GGCCCGGGATCTATTCTATGCATTGTGGATTCCCGACTTGTTCATGCGGCGGGTCGAGAA 2312
Query 97043 CGAC--GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGC 97100
||| |||| ||||| || | | | ||| || | || || |||| ||
Sbjct 2313 GGACCAGGTG-----TGGAGTCTTTTCTCCGAGGACACGGCCCCGGGGTTGTCGGACACA 2367
Query 97101 TGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGA 97160
||||| | ||||| ||| | |||| | ||||||||||||||||| ||| | ||
Sbjct 2368 TGGGGGGCCGAGTTCGAGTCTCTGTACGAGCAATACGAGCAAGAGGGCCGGTACCTAAGG 2427
Query 97161 CGAGTCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACT 97220
| || | || || | | ||| || || ||| | ||| |||||||| ||
Sbjct 2428 CAGGTGAAGGCCCGTAAGGTCTGGGAGAGGATTGTGTACTCGCAGACGGAGACTGGGACA 2487
Query 97221 CCGTACATTCTCTACAAGGATACCGTGAATCGC-AACAGCAACCAACGCCACTTGGGCAC 97279
|||| || |||||||| ||| |||| | ||| || ||||||| || | |||||
Sbjct 2488 CCGTTTATGCTCTACAAAGAT-GCGTGCAACGCGAAATGCAACCAGAAGAACCTCGGCAC 2546
Query 97280 CATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGC 97339
|||||| || ||||| ||| || | || |||||| | | ||| |||| ||
Sbjct 2547 GATCAAGTCGTCGAATCTCTGCTGCGAGGTGGTCGAGTACTCGTGCAAGGATGAGATCGC 2606
Query 97340 AGTTTGCGTTCTGGCATCGGTCAATCTGCCCAAGTTTGTAGAGG 97383
|| ||| || | |||||| |||| | |||||| ||||
Sbjct 2607 GGTGTGCAACCTCGGCTCGGTCGGGTTGCCGATGTTTGTGGAGG 2650
>seq14
Length=27313
Score = 96.9 bits (106), Expect = 5e-15
Identities = 212/312 (68%), Gaps = 8/312 (3%)
Strand=Plus/Minus
Query 97953 TGGAACGATGACATGGCCCAGTTGATCATGTACAACAATGGGTCCATTCAAAACATTACC 98012
|||||||||| ||| | || ||||| | ||||||| |||||||| ||| |||||
Sbjct 16666 TGGAACGATGCAATGAAGAATTTCATCATTCATGACAATGGATCCATTCAGAAC-TTACC 16608
Query 98013 -ATCATCCCGGAAGAGTTGCGCAGAATCTACAAGACTGTCTGGGAGATTCCGACCAAGAC 98071
| || || || | | | | | |||| |||||| ||||| || | || |
Sbjct 16607 TAATATTCCAGACAACATTAAGAAATTGTACAGGACTGTTTGGGAACTTTCTCAGAAATC 16548
Query 98072 GCTGATCGATATGGCTGCCGACAGAGGTGTCTACATTGACCAGAGTCAATCGTTCAATCT 98131
| ||||| ||||||||||||||||||| ||||||| |||| |||||| | || |
Sbjct 16547 TGTCATCGACATGGCTGCCGACAGAGGTGCCTACATTTGCCAGTCTCAATCCATGAACAT 16488
Query 98132 GTACGTTGCCGAGCCCACCTACAGTCGTA---TGACTTCGATACACTTTTACGCATGGAA 98188
|| |||| ||| ||| | ||| |||| || || |||||||||| |||||
Sbjct 16487 CCAC-TTGCAATCGCCAACTATGG--GTAAGTTGACGTCCATGCACTTTTACGGCTGGAA 16431
Query 98189 CAAGGGCCTCAAGACGGGCATGTACTATCTGAGAACAAAGTCGGCCACCAATGCCATACC 98248
||||| | ||||| || |||||||| || | ||| || | || | |||||| |
Sbjct 16430 GAAGGGTTTGAAGACAGGTATGTACTACTTGCGTACACAGGCCGCTGCTCGTGCCATCCA 16371
Query 98249 ATTTACGGTGGA 98260
||| || || ||
Sbjct 16370 ATTCACCGTTGA 16359
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741050140551280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |