Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq423 116 3e-21 seq208 87.8 1e-12 >seq423 Length=50725 Score = 116 bits (128), Expect = 3e-21 Identities = 168/236 (71%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| ||||| || ||||| ||||| || || || |||||||| || Sbjct 3597 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGAC 3656 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | |||| |||| || || || || ||||| | ||||| | || || || |||| Sbjct 3657 AAAGTTCTGCCGTCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGA 3716 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 ||||| || ||||| || || || ||| | || || || ||| | || || Sbjct 3717 ATTCCCTCCTTGTCTTGGATCTTTTGTTTGACATTGTCAATAGTGTCGGAAGACTCAACC 3776 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAA 15372 || | ||| ||||| ||||| |||| ||| || || ||||||||||| ||||| || Sbjct 3777 TCAAGGGTGATGGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCAT-TTTGATAA 3831 >seq208 Length=10633 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||||||||| || || || ||||| || || || ||||| |||||||| || Sbjct 9452 CCTCCTCTCAATCTCAAGACCAAGTGAAGAGTTGACTCCTTTTGGATGTTGTAGTCAGAC 9511 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | |||| | || || || || || || || | ||||| | || || || ||| Sbjct 9512 AAAGTTCTGCCATCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGTGGG 9571 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 ||||| || || || || || ||| ||| | || ||||| || | || || Sbjct 9572 ATTCCCTCCTTATCCTGGATCTTTTGCTTGACATTGTCAATGGTGTCTGAAGACTCCACC 9631 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15367 || ||||| || || ||||| |||| || || || ||||||||||| ||| Sbjct 9632 TCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTTT 9682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362174883050298