Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq423 100 2e-16
seq208 95.1 9e-15
>seq423
Length=50725
Score = 100 bits (110), Expect = 2e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATC-GT 43952
||| ||||||||||| || ||||| || || ||| ||| || ||||| || || || |
Sbjct 3596 ACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGA 3655
Query 43953 TTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAG 44012
|| | || | || ||||| || || || ||||| ||||| | ||||| || | |
Sbjct 3656 CAAAGTTCTGC-CGTCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTG 3714
Query 44013 GTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCA 44072
| | || || || ||| || ||||||||||| | ||| ||| || | | ||| |
Sbjct 3715 GAATTCCCTCCTTGTCTTGGATCTTTTGTTTGACATTGTCAATAGTGTCGGAAGACTCAA 3774
Query 44073 CATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
| || | || || || |||||||| |||||||| || || ||||||||
Sbjct 3775 CCTCAAGGGTGATGGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCAT 3823
>seq208
Length=10633
Score = 95.1 bits (104), Expect = 9e-15
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATC-GT 43952
||||||||||||||| || ||||| || || || ||| ||||| || || || || |
Sbjct 9451 ACCTCCTCTCAATCTCAAGACCAAGTGAAGAGTTGACTCCTTTTGGATGTTGTAGTCAGA 9510
Query 43953 TTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAG 44012
|| | || |||| ||||| || || || ||||| ||||| | ||||| || | |
Sbjct 9511 CAAAGTTCTGC-CATCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGTG 9569
Query 44013 GTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCA 44072
| | || || ||||| || ||||| ||||| | ||| || |||| | |||||
Sbjct 9570 GGATTCCCTCCTTATCCTGGATCTTTTGCTTGACATTGTCAATGGTGTCTGAAGACTCCA 9629
Query 44073 CATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
| || | || || || ||||| || || ||||| || || ||||||||
Sbjct 9630 CCTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCAT 9678
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354773371272744
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |