Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq290 116 3e-21
>seq290
Length=58723
Score = 116 bits (128), Expect = 3e-21
Identities = 535/841 (64%), Gaps = 11/841 (1%)
Strand=Plus/Plus
Query 12874 AACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCCATAAAATCGAA 12933
|||||| || ||||| ||||| || || || | || ||||| || |||||||| |||||
Sbjct 52811 AACTCTCTTCTCAAAGAAGTTAGTCTTACCAGCCAAGGAAATGTTCTCCATAAAGTCGAA 52870
Query 12934 AGGATTTTTCGAACAATAGTATTTTTTACACCCTAATTCTAGTAACAATCTGTCAGCAAC 12993
||||| | | | || ||| | ||| || || | | | ||||||||| |||
Sbjct 52871 TGGATTGGTAGCATTGTAAACTTTCTCACATCCCAAAGCAATAAGCAATCTGTCGGCACA 52930
Query 12994 AAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTACAGGCATAGC 13053
|| || | || || ||| | ||| ||||||| || | || || || | |||
Sbjct 52931 GAATTCAACATAATGGGCCATCATATCGAAGTTCATACCAAGCAAAGAAACTGGGAGAGC 52990
Query 13054 TTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATGTCTCTTATTACGTT 13113
|| | | || | || || |||| || || ||| | | || | ||||| ||
Sbjct 52991 ATCACTCCAGAAAGTCTTCTCAATATTGACAGCCTCGGTCATAATTT-TCTTAATAATAA 53049
Query 13114 CTCTAAT-GGAGGATTTGATAGATGCTTAAACATCATACATGCAAAATCACAGTGCAATC 13172
| || | || |||| | ||| |||| | ||||| |||||| || | |
Sbjct 53050 CCTTACTAGGTGGATGCTTCAAATGAGAGAACAAGAGGCATGCGAAATCAGTATGTAGAC 53109
Query 13173 CTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTT 13232
| ||||| || | || ||||| || || || || || || ||||| | |||| || |
Sbjct 53110 CCTCATCCCTGCAAATAAGCTCATTGGAGAAGGTAAGTCCAGGCATCAAACCTCTCTTCT 53169
Query 13233 TAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACG 13292
| | ||| || |||| |||||||| || || || || | || || | || ||||| |
Sbjct 53170 TCAACCAGAAGATAGAGGCAAACGAGCCAGAGAAGAAAACACCCTCGATGGCAGCAAAGG 53229
Query 13293 CTATCAACCTTTCACCATACGTACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTG 13352
| | ||| || ||| ||||| | || | | | | |||||| | ||||| |
Sbjct 53230 CGACCAATCTCTCAGCATACAAAGCATCATCATTGTTTATCCATCTCAAAGCCCATAGAG 53289
Query 13353 CTTTTTGTTTAACGCAGTTCATATTTTCT--ATTGCGTTAAATAAATAAtttttttCCTT 13410
| |||| |||| || | || | | || || || || || || | |||||
Sbjct 53290 CCTTTTCCTTAAT--AGGTGGAATGGTATGGATAGCATTGAACAAGTAGTCGGACTCCTT 53347
Query 13411 ACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCAT 13470
|||| || || || || | || | | || | || || || || || || |
Sbjct 53348 CTTGTCGGTGATGTACGTTTCAAGTAAAAGGGAGTAGGTCTCAGAGTGGATGTTCTCAAC 53407
Query 13471 CGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTT-CGGAGTAAAATC 13529
| || |||||||| ||||| ||| || |||| || ||||| | | | ||||
Sbjct 53408 CATAATCTGGAAACCGTAAAAGGCTCTTGCTTCTGGTAATTGAACCTGCTTCATGAAAT- 53466
Query 13530 TTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCT 13589
||| ||| ||||| |||| ||| || || ||| ||| |||||||| || | | ||
Sbjct 53467 TTTGTGCCAAGTTCTCGTCAACAATACCATCAGAAGCGGCAAAAAATGCCAAAACACGCG 53526
Query 13590 TAATAAAttttttttCGTTTTCTGACAACTTTAA---CCAATCTGGAAAATCTTTTGATA 13646
||||| | | | ||||| | || ||| ||| || | || || || || |
Sbjct 53527 ATATAAAGTATCTCTCGTTGGCATTCATCTTGTTGTTCCAGTCAGTCAAGTCCTTAGAGA 53586
Query 13647 AATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATACATCATCCATATAT 13706
||| | ||||||| | ||||||||||| || | |||||||||||||| ||||||||
Sbjct 53587 GATCAATCTCCTCAGCAGTCCAAAAAGAGGCCTCCGCCTTCTTATACATTTGCCATATAT 53646
Query 13707 C 13707
|
Sbjct 53647 C 53647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430977262959156
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |