Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq224 152 6e-32
>seq224
Length=67412
Score = 152 bits (168), Expect = 6e-32
Identities = 468/709 (66%), Gaps = 40/709 (6%)
Strand=Plus/Plus
Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457
|| |||||||| ||||| | ||||| | || |||||| | |||||||||| ||
Sbjct 27397 AAATTTGAAGATATGGGTATTGGTGGTTTGGACAACGAATTTACCTCTATTTTCAGAAGA 27456
Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAA-TaaaaaaaTTAGGCTGTAAACATAT 164516
|||||||| || ||| |||| | || || | |||| || || | | ||| |
Sbjct 27457 GCATTTGCATCAAGAATT-TTCCCACCGGCATTGGTGGAAAAGTTGGGAATTCAGCATGT 27515
Query 164517 AAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCAT 164576
||||| || | || |||||||||| ||| || || || || || ||| | ||
Sbjct 27516 CAAAGGTATGCTTTTGTATGGACCTCCAGGTACGGGAAAGACTTTGATTGCTAGGCAAAT 27575
Query 164577 TGCTCAAGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGA 164632
|| | ||| | || ||| || || ||| || |||||||| ||||| ||| | |
Sbjct 27576 TGGT-AAGATGTTGAAT-GCAAAGGAGCCG--AAGATTGTTAACGGTCCGGAAATCCTAT 27631
Query 164633 ACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAG 164692
||||||||| ||| || |||| ||| ||||||| ||||| | || || || | |
Sbjct 27632 CCAAATATGTTGGTTCTTCTGAAGAAAATATTAGAAATTTGTTCAAAGATGCAGAGGCTG 27691
Query 164693 AACA-AAAGAAAGCAGGTTTA-GC-TAGTAAATTACATGTTATTGTTTTTGATGAGATAG 164749
| | ||| ||| ||| | | || | | | || ||| | || | || |||||| | |
Sbjct 27692 AGTATAAACAAA--AGGGTGATGCATCATCACTT-CATATCATCATATTCGATGAGTTGG 27748
Query 164750 ATGCTCTTTGCAAAAAACGTGGT------GATAATATTATTCATGATGCAG------TGG 164797
|| | ||| ||| | |||||| | | || || | || |||| |||
Sbjct 27749 ATTCAATTTTCAAGCAGCGTGGTTCCAGAGGTGATGGTACTGGTGTCGCAGATAATGTGG 27808
Query 164798 TTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAG 164857
|||||||||| ||| ||||||| |||||||| || ||||| || ||| | | | |
Sbjct 27809 TTAATCAGTTACTTGCTAAAATGGATGGTGTTGACCAGTTAAACAACATTCTCGTGATTG 27868
Query 164858 GTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAAT 164917
| ||||||||| ||| ||| || |||||||| ||||| | || ||||| |||| |||
Sbjct 27869 GAATGACCAACAGACGTGACTTGATTGATGAAGCTTTGCTTCGTCCTGGAAGATTTGAAG 27928
Query 164918 TGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTTCATG 164977
|| || | || ||| || || ||| | || ||||| |||||||| || || |
Sbjct 27929 TGCAAGTGGAGATACATTTGCCAGACGAGGAGGGACGAAACCAAATTTTGGAAATTAA-- 27986
Query 164978 TGGCTAAAATGAAATCCTGTGATA------TATTATCTCCCGATGTAGATTTAAATAAAA 165031
| |||||| |||| | |||||| || | | ||||| ||| | |||||
Sbjct 27987 -GACTAAAA--AAATGC-GTGATAATGGAGCTTTGGCATCGGATGTTGATCTTCATAAAC 28042
Query 165032 TAGCTGCCGAAACTAAAAATTATAGTGGTGCTGAATTAGAGGGATTAGT 165080
| ||| ||| || |||| |||||||||||||| || || || ||
Sbjct 28043 TCGCTAAACTAACCAAGAATTTCAGTGGTGCTGAATTGGAAGGTTTGGT 28091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595864715464800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |