Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq224 152 6e-32 >seq224 Length=67412 Score = 152 bits (168), Expect = 6e-32 Identities = 468/709 (66%), Gaps = 40/709 (6%) Strand=Plus/Plus Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457 || |||||||| ||||| | ||||| | || |||||| | |||||||||| || Sbjct 27397 AAATTTGAAGATATGGGTATTGGTGGTTTGGACAACGAATTTACCTCTATTTTCAGAAGA 27456 Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAA-TaaaaaaaTTAGGCTGTAAACATAT 164516 |||||||| || ||| |||| | || || | |||| || || | | ||| | Sbjct 27457 GCATTTGCATCAAGAATT-TTCCCACCGGCATTGGTGGAAAAGTTGGGAATTCAGCATGT 27515 Query 164517 AAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCAT 164576 ||||| || | || |||||||||| ||| || || || || || ||| | || Sbjct 27516 CAAAGGTATGCTTTTGTATGGACCTCCAGGTACGGGAAAGACTTTGATTGCTAGGCAAAT 27575 Query 164577 TGCTCAAGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGA 164632 || | ||| | || ||| || || ||| || |||||||| ||||| ||| | | Sbjct 27576 TGGT-AAGATGTTGAAT-GCAAAGGAGCCG--AAGATTGTTAACGGTCCGGAAATCCTAT 27631 Query 164633 ACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAG 164692 ||||||||| ||| || |||| ||| ||||||| ||||| | || || || | | Sbjct 27632 CCAAATATGTTGGTTCTTCTGAAGAAAATATTAGAAATTTGTTCAAAGATGCAGAGGCTG 27691 Query 164693 AACA-AAAGAAAGCAGGTTTA-GC-TAGTAAATTACATGTTATTGTTTTTGATGAGATAG 164749 | | ||| ||| ||| | | || | | | || ||| | || | || |||||| | | Sbjct 27692 AGTATAAACAAA--AGGGTGATGCATCATCACTT-CATATCATCATATTCGATGAGTTGG 27748 Query 164750 ATGCTCTTTGCAAAAAACGTGGT------GATAATATTATTCATGATGCAG------TGG 164797 || | ||| ||| | |||||| | | || || | || |||| ||| Sbjct 27749 ATTCAATTTTCAAGCAGCGTGGTTCCAGAGGTGATGGTACTGGTGTCGCAGATAATGTGG 27808 Query 164798 TTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAG 164857 |||||||||| ||| ||||||| |||||||| || ||||| || ||| | | | | Sbjct 27809 TTAATCAGTTACTTGCTAAAATGGATGGTGTTGACCAGTTAAACAACATTCTCGTGATTG 27868 Query 164858 GTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAAT 164917 | ||||||||| ||| ||| || |||||||| ||||| | || ||||| |||| ||| Sbjct 27869 GAATGACCAACAGACGTGACTTGATTGATGAAGCTTTGCTTCGTCCTGGAAGATTTGAAG 27928 Query 164918 TGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTTCATG 164977 || || | || ||| || || ||| | || ||||| |||||||| || || | Sbjct 27929 TGCAAGTGGAGATACATTTGCCAGACGAGGAGGGACGAAACCAAATTTTGGAAATTAA-- 27986 Query 164978 TGGCTAAAATGAAATCCTGTGATA------TATTATCTCCCGATGTAGATTTAAATAAAA 165031 | |||||| |||| | |||||| || | | ||||| ||| | ||||| Sbjct 27987 -GACTAAAA--AAATGC-GTGATAATGGAGCTTTGGCATCGGATGTTGATCTTCATAAAC 28042 Query 165032 TAGCTGCCGAAACTAAAAATTATAGTGGTGCTGAATTAGAGGGATTAGT 165080 | ||| ||| || |||| |||||||||||||| || || || || Sbjct 28043 TCGCTAAACTAACCAAGAATTTCAGTGGTGCTGAATTGGAAGGTTTGGT 28091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595864715464800