Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq139 100 4e-17 >seq139 Length=14740 Score = 100 bits (110), Expect = 4e-17 Identities = 187/272 (69%), Gaps = 2/272 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 |||||| ||||| | | ||| ||| |||||||||| ||||| ||||||||||| || | Sbjct 7107 CGCTAAACGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACCAAGCCTGCAA 7049 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 || | | |||| | | ||||| |||||| | |||||| ||| | || || || Sbjct 7048 TCAGAAGATTGGCAAGAAGAGGTGGTGTCAAGAGAATCTCTGCTTTGATTTACGAGGAAG 6989 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 | | | |||| | || |||||| | | ||| ||| ||||| | || || | Sbjct 6988 TCAGAGCTGTTCTTAAATCCTTCCTTGAAAACGTCATCAGAGATGCCGTTACTTACACTG 6929 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 |||||||||| | |||||||| ||||| ||||| | || || || ||||| | || | Sbjct 6928 AGCACGCTAAGAGAAAGACTGTTACCTCTTTGGATGTTGTTTACGCTTTGAAGAGACAGG 6869 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702 | | | |||| ||||| || ||||| || Sbjct 6868 GAAGAACCCTTTACGGTTTCGGTGGTTAAGCT 6837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074305807754