Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq14 269 3e-67
seq290 208 9e-49
>seq14
Length=27313
Score = 269 bits (298), Expect = 3e-67
Identities = 1319/2069 (64%), Gaps = 51/2069 (2%)
Strand=Plus/Plus
Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054
|||||||| |||| | | |||| | ||||| | |||||||| || || || | |
Sbjct 16365 GTGAATTGGATGGCACGAGCAGCGGCCTGTGTACGCAAGTAGTACATACCTGTCTTCAAA 16424
Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCG-GATCTGCTA 62112
|| |||| |||||||| ||||| ||| | || ||| | | ||| ||| |
Sbjct 16425 CCCTTCTTCCAGCCGTAAAAGTGCATGGACGTCAACTTACCCATAGTTGGCGAT-TGCAA 16483
Query 62113 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 62172
||||| ||||| |||||| || ||| |||| || ||||| |||||||| | |
Sbjct 16484 G-TGGATGTTCATGGATTGAGACTGGCAAATGTAGGCACCTCTGTCGGCAGCCATGTCGA 16542
Query 62173 TGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62232
||| | || || | || |||||||| ||| | || | | |||||| | |||||||
Sbjct 16543 TGACAGATTTCTGAGAAAGTTCCCAAACAGTCCTGTACAATTTCTTAATGTTGTCTGGAA 16602
Query 62233 GGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCAT 62289
|| | || ||||||||||||||| || || || |||||| || |||| |
Sbjct 16603 TATTAGGTAAGTTCTGAATGGATCCATTGTCATGAATGATGAAATTCTTCATTGCATCGT 16662
Query 62290 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTC 62349
|||||| | | || | | | || || | | ||||| || | || || || |
Sbjct 16663 TCCATATTCCCATATCAATAAGGTCCCTTAGCATGTAAGGATTGACAATCTGGAACTCAC 16722
Query 62350 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTC 62409
||| | ||||| | || || ||| ||| | || || | |||| || | |
Sbjct 16723 CAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGGCTCAAAGCACTCGTTGTAAC 16782
Query 62410 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 62469
||| ||| |||| || || ||||| |||||||| || ||||| | |||||||||||
Sbjct 16783 CCATAATCTGAGAGGTAGAGGCAGTTGGCATAGGAGCGACCAAAAGCGAATTTCTAAGAC 16842
Query 62470 CGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNN 62529
| | | ||| || | || | || ||||||| ||| ||||| | || | |
Sbjct 16843 CATCCTTAGCGATCTTGGCCTTCAAAGTCTCCCAATCCCACAGATCAGTTGG--CTTCTT 16900
Query 62530 NNNNNNNNNNNNNT--TGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTA 62587
| || |||||||| || || || ||| | || || |||||
Sbjct 16901 ATTCCACATATCGTACTGGAGAATACCCTTGGAAGCTGGAGAGCCTTCGTAGGTCTCGTA 16960
Query 62588 TGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTC 62647
| || || | | ||| || | | |||| | ||||| | || | ||| ||
Sbjct 16961 CGTACCCTCTTCCACAGAAAGCTGATTTGATTCCTCCAGAGCACCATGGTACAAGGTCTC 17020
Query 62648 GAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAG-AGAA 62706
||| |||| | || || || | ||||| ||| |||||||| ||| | || | |
Sbjct 17021 GAATATCTGTATGTTAAGCTCACGAGCTTCTGGGCAGTCAAATGGC-AATCTGAGCATGA 17079
Query 62707 TAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGA 62766
|||| ||||| | ||||||||||||| | |||||||||| | |||| | || |||
Sbjct 17080 AGAACGTATCCGCAAGACCTTGAACACCAAGAGCGATAGGTCTGTTTCTCATGTTGGAGT 17139
Query 62767 TTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TGA 62823
| || ||||||| || || ||||| | || || | || | || | |||
Sbjct 17140 TGCGGGCCTCTGGAACTGGGTAGTAATTCCTGTCAATGACACGGTTCAAGTTACGTGTGA 17199
Query 62824 CAA------TTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTATTA 62877
||| | | ||| || | || | |||| || | | || | | |
Sbjct 17200 CAACCTTGGTGATCTTGTGCAACTTCTCAAAGTTGAACCAAC--AGTGATCCTTGTCGGA 17257
Query 62878 CA-AACATGTTCAAGGCAA-CAGATG----CCAGATTACAAACGGCTACCTCATTAGCAT 62931
| |||| | || ||||| || ||| ||| ||||| || | ||||||| | |
Sbjct 17258 CTCAACAAATGCA-GGCAAGCAAATGTTTGCCAAGTTACACACACCGACCTCATCTGGAG 17316
Query 62932 CCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTT 62991
| || | | | |||| ||| | ||| | ||||||| ||||| || || | ||
Sbjct 17317 AAGAGTACTCGACAACCTCACAGCACAAATTCGAAGACTTGATGGTTCCCAAGTTCTTTT 17376
Query 62992 GATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCT 63051
||||||||||| |||| || |||||||| |||| ||||| || ||||| ||||| |||
Sbjct 17377 GATTACTCTTTCTGTTGCAGGCATCCTTGTAAATCATGAAAGGCGTACCGGTTTCTGTCT 17436
Query 63052 GAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGAT-TTGTATCTCCT 63109
||| || | |||| | ||| | | || ||||||| | | | || | |||
Sbjct 17437 GAGCCTCCAAAATCTGATACCACAACTTCT-GAGCCTTAACGGTTCTTCTTCCACGTCCC 17495
Query 63110 TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCC 63169
| || | ||||| | || ||||| ||| |||||||| || |||||| | ||
Sbjct 17496 TCCT-TCTCGTAACGAGTGTACAACTTTTCAAACTCGTCACCATAAACATCTGAAAGACC 17554
Query 63170 AGGACATTCATCCGGACACATCAACGACCAC-TCTCCGTCATCCTTCA-CTCGTTTCATA 63227
|| ||| ||| | | ||| | ||| | || | | |||| | || |||||
Sbjct 17555 TGGGGCCTCAGAAGGAGAAAACAAAGTCCATGTATCATT--TTGTTCAACACGCTTCATG 17612
Query 63228 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 63287
|| |||||||| |||||||||||| || | ||| | | | ||||| || ||
Sbjct 17613 AATAGATCAGGGATCCAAAGAGCTGGGAACAAATCACGTGCACGGATCTCCTCCTTACCG 17672
Query 63288 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63347
|||||| | | ||||| ||| | | ||||| | |||||| ||||| ||||| ||
Sbjct 17673 TGATTCTTCCTGATATCGATGAAGTCAAAGATATCTGCATGCCAAGGTTCTAAGTAGATA 17732
Query 63348 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63407
|| || | || || | ||||| || || || || | || ||||| || | || |
Sbjct 17733 GCAATGGCACCTGGTCTCTTGTTACCACCTTGGTCAACATACCTAGCAGTACTGTTGAAC 17792
Query 63408 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCA 63467
|| | | ||| ||||||||||| || ||| |||| |||||||| | || || ||
Sbjct 17793 ACACGAACCATAGGAATAATACCATTGGATGTACCGTTGGTACCAGCAATGTATGAACCT 17852
Query 63468 CTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63527
| | |||||| ||| ||| |||||| || || || ||| | || || || || ||
Sbjct 17853 GTAGAACGAATGTTATGAATATGTAGACCAATACCACCAGCCGTCTTGGAAATCAAGGCA 17912
Query 63528 CATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAA 63587
|| |||| || ||||| |||||||| || || ||||| |||| || || ||
Sbjct 17913 CACTGTTTCAAAGTGTCGTAGATACCTTCAATAGAGTCATCCTTCATTGCAACTAAGAAG 17972
Query 63588 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 63647
|| ||||| || | || ||| || |||||||| || || ||||| ||||| ||
Sbjct 17973 CAAGACGACATCTGTGGGCGTGGAGTACCGGCATTAAACAATGTTGGAGAGGCGTGTGTG 18032
Query 63648 AACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATG 63706
|| || | | || | | || |||| ||| | | || ||||| || | ||
Sbjct 18033 AAGTATCTCTTCGACATCAAATCATACGACTCCAAAACTTTAGGAATATCATCACCG-TG 18091
Query 63707 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 63766
|||||| || || || | ||| | | |||||||| || || | | ||| |||||
Sbjct 18092 AATTCCAACGGCAACTCTCATAAGAAGATGCTGAGGCCTCTCTGCAACCTTACCATTTAT 18151
Query 63767 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCT 63824
|||||| || || || | || ||||| ||||| ||||| || ||||| ||
Sbjct 18152 CCTCAACAGATATGAACGCTCTAGGGTCTTAAAGCCAAAGTAGTTATAGCTGAAA--TCA 18209
Query 63825 CGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTG 63884
|| || || |||| ||||||| | | |||||| | || | || || | ||
Sbjct 18210 CGGTCATAGTTAATGGCCGAGTTCAACTCATCCTTGTGCTTCATGACAAT---CTTGTAA 18266
Query 63885 A-TACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAA 63941
| | ||| || || || || || | ||| |||| || ||| ||||||| | | |
Sbjct 18267 ACTTCTTCAGAGATCATAGGGGATTTCTTCTGGGTTTTTGGGTTATAATAGTTGTAAAGA 18326
Query 63942 TCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATT 64001
|| || || || ||| ||| | || || || | |||||| | ||| || | ||| | |
Sbjct 18327 TCTTCAATAACATCAGAGAATGGCTTCTTAGTCTGCTTGTGCAAATTAGAAATGGCAAGT 18386
Query 64002 CTGGCGGCTAGAATGGCATAATCCGGATG 64030
|||||||| | | | |||||||| |||||
Sbjct 18387 CTGGCGGCCAAAGTAGCATAATCTGGATG 18415
>seq290
Length=58723
Score = 208 bits (230), Expect = 9e-49
Identities = 596/906 (66%), Gaps = 14/906 (2%)
Strand=Plus/Plus
Query 32992 TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTT 33051
|||| | |||||| || || ||||| ||| || | || || || || |||||
Sbjct 52776 TCTTTTGCCATAACACCAGCCTTCTGGTAGTCAGAAACTCTCTTCTCAAAGAAGTTAGTC 52835
Query 33052 TTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAttttt 33111
|| || |||| || || || ||||| || || || ||||||||| |||| |||| |||
Sbjct 52836 TTACCAGCCAAGGAAATGTTCTCCATAAAGTCGAATGGATTGGTAGCATTGTAAACTTTC 52895
Query 33112 ttAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATT 33171
| | ||||||| || || |||||| || || |||||| | ||| ||||||
Sbjct 52896 TCACATCCCAAAGCAATAAGCAATCTGTCGGCACAGAATTCAACATAATGGGCCATCATA 52955
Query 33172 TCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTA-AGAAATTCTTGTTCAAT 33230
|| | ||||| || | | |||||| ||||| || | ||||| |||| | ||||
Sbjct 52956 TCGAAGTTCATACCAAGCAAAGAAACTGGGAGAGCATCACTCCAGAAAGTCTTCT-CAAT 53014
Query 33231 GGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATG 33290
|| || || || ||||| ||| | | | ||| ||||||||| |||||
Sbjct 53015 ATTGACAGCCTCGGTCATAATTTTCTTAATAATAACCTTACTAGGTGGATGCTTCAAATG 53074
Query 33291 TTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTT 33350
|||| | ||||||||||| || |||||||| || || | ||| || || ||
Sbjct 53075 AGAGAACAAGAGGCATGCGAAATCAGTATGTAGACCCTCATCCCTGCAAATAAGCTCATT 53134
Query 33351 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGA 33410
||| || || ||||| ||||| | || | ||| || | ||| || || || || || ||
Sbjct 53135 GGAGAAGGTAAGTCCAGGCATCAAACCTCTCTTCTTCAACCAGAAGATAGAGGCAAACGA 53194
Query 33411 TCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGC 33470
||||| ||||| | || || | ||||||||||| | | |||||| |||| ||
Sbjct 53195 GCCAGAGAAGAAAACACCCTCGATGGCAGCAAAGGCGACCAATCTCTCAGCATACAAAGC 53254
Query 33471 GCTGTCA---TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33527
||| | |||||| | |||||| ||||| | || | | || || ||
Sbjct 53255 ATCATCATTGTTTATCCATCTCAAAGCCCATAGAGCCTTTTCCTTAATAGGTGGAATGGT 53314
Query 33528 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA 33587
| || ||||| || | |||| || || | || | | || || || | ||
Sbjct 53315 ATGGATAGCATTGAACAAGTAGTCGGACTCCTTCTTGTCGGTGATGTACGTTTCAAGTAA 53374
Query 33588 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 33647
||| || | || || || ||||| |||| ||||| || ||||| || |||
Sbjct 53375 AAGGGAGTAGGTCTCAGAGTGGATGTTCTCAACCATAATCTGGAAACCGTAAAAGGCTCT 53434
Query 33648 AGCCTC-GGTAATCTGTA-CTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATT 33705
|| || |||||| || | || || | |||| || ||||| || || | || ||
Sbjct 53435 TGCTTCTGGTAAT-TGAACCTGCTTCATGAAAT-TTTGTGCCAAGTTCTCGTCAACAATA 53492
Query 33706 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT 33765
|| ||| || |||||||| ||||| ||| | |||||| ||| | |||| ||| ||
Sbjct 53493 CCATCAGAAGCGGCAAAAAATGCCAAAACACGCGATATAAAGTATCTCTCGT-TGGCATT 53551
Query 33766 AGT----TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAA 33821
| || ||||| ||| | | || ||||| | ||| | || || | ||||||||
Sbjct 53552 CATCTTGTTGTTCCAGTCAGTCAAGTCCTTAGAGAGATCAATCTCCTCAGCAGTCCAAAA 53611
Query 33822 TGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAAC 33881
|| ||||| ||||| |||||||| | ||| || |||| || || || ||||| || ||
Sbjct 53612 AGAGGCCTCCGCCTTCTTATACATTTGCCATATATCATCGTACTGAATAGGGAACATCAC 53671
Query 33882 AAATCT 33887
||||||
Sbjct 53672 AAATCT 53677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622939584470480
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