Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016-
09-05] 978 sequences; 11,766,522 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq208 118 9e-22
seq423 109 5e-19
>seq208
Length=10633
Score = 118 bits (130), Expect = 9e-22
Identities = 167/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 115282 AAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTC 115341
||||||||||||||| || || || | ||||| || || || ||| | || ||||||
Sbjct 9682 AAAAATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACTATCACCTTGGAGGTGGAGTC 9623
Query 115342 CAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTG 115400
||||| || ||||| || || ||||| || ||||| || || |||| ||
Sbjct 9622 TTCAGACACCATT-GACAATGTCAAGCAAAAGATCCAGGATAAGGAGGGAATCCCACCTG 9564
Query 115401 ATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATT 115460
||||||| ||| | || | ||| || || || || || |||| || ||| || | || |
Sbjct 9563 ATCAGCAGAGATTGATCTTTGCCGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCTGACT 9504
Query 115461 ATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
| ||||| ||||| ||||| ||| | || |||| ||||||||| |||||||
Sbjct 9503 ACAACATCCAAAAGGAGTCAACTCTTCACTTGGTCTTGAGATTGAGAGGAGG 9452
>seq423
Length=50725
Score = 109 bits (120), Expect = 5e-19
Identities = 166/234 (71%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|||||||||||||| || || || | || || || ||||| ||| | || |||||
Sbjct 3826 AAAATGCAAATTTTCGTTAAGACTTTGACCGGTAAGACCATCACCCTTGAGGTTGAGTCT 3767
Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401
||||||| || ||||| || |||||||| || || || || || | || |||
Sbjct 3766 TCCGACACTATT-GACAATGTCAAACAAAAGATCCAAGACAAGGAGGGAATTCCACCTGA 3708
Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461
|||||| ||| | || | ||| || || || || || || | || ||| || | || ||
Sbjct 3707 TCAGCAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGACGGCAGAACTTTGTCTGACTA 3648
Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515
|||||||| || ||||| ||| | || |||| ||||||||| |||| || ||
Sbjct 3647 CAACATTCAGAAGGAGTCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGTAA 3594
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425338930165360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |