Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20bruxellensis_20[genbank_20GCA_5F001719535.1_202016- 09-05] 978 sequences; 11,766,522 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq208 118 9e-22 seq423 109 5e-19 >seq208 Length=10633 Score = 118 bits (130), Expect = 9e-22 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 115282 AAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTC 115341 ||||||||||||||| || || || | ||||| || || || ||| | || |||||| Sbjct 9682 AAAAATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACTATCACCTTGGAGGTGGAGTC 9623 Query 115342 CAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTG 115400 ||||| || ||||| || || ||||| || ||||| || || |||| || Sbjct 9622 TTCAGACACCATT-GACAATGTCAAGCAAAAGATCCAGGATAAGGAGGGAATCCCACCTG 9564 Query 115401 ATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATT 115460 ||||||| ||| | || | ||| || || || || || |||| || ||| || | || | Sbjct 9563 ATCAGCAGAGATTGATCTTTGCCGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCTGACT 9504 Query 115461 ATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 | ||||| ||||| ||||| ||| | || |||| ||||||||| ||||||| Sbjct 9503 ACAACATCCAAAAGGAGTCAACTCTTCACTTGGTCTTGAGATTGAGAGGAGG 9452 >seq423 Length=50725 Score = 109 bits (120), Expect = 5e-19 Identities = 166/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 |||||||||||||| || || || | || || || ||||| ||| | || ||||| Sbjct 3826 AAAATGCAAATTTTCGTTAAGACTTTGACCGGTAAGACCATCACCCTTGAGGTTGAGTCT 3767 Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 ||||||| || ||||| || |||||||| || || || || || | || ||| Sbjct 3766 TCCGACACTATT-GACAATGTCAAACAAAAGATCCAAGACAAGGAGGGAATTCCACCTGA 3708 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 |||||| ||| | || | ||| || || || || || || | || ||| || | || || Sbjct 3707 TCAGCAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGACGGCAGAACTTTGTCTGACTA 3648 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515 |||||||| || ||||| ||| | || |||| ||||||||| |||| || || Sbjct 3647 CAACATTCAGAAGGAGTCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGTAA 3594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425338930165360